| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1308 |
|---|
| Symbol | |
|---|
| ID | 3240856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1357171 |
|---|
| End bp | 1357962 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637167957 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_188880 |
|---|
| Protein GI | 57867190 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000478564 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAGCAGT TTTATCAGTT AGGGTGGACA CTTGATTCGG CAGGAGGAGC TTCTGGTGAA
GCATATATGG CTGAACAAGA TGGACAAAAA TTATTTTTAA AACGAAATTC AAATCCTTTT
ATTGCTGCGC TATCTGCAGA AGGAATTGTA CCTAAACTTG TTTGGACGAA ACGTATTGAA
ACAGGTGAAG TAGTAACAGC TCAGCATTGG AAAAATGGCA GAGAATTAAA TGAAGATGAA
ATGAACCAAA CAAGAGTCGC TGAACTACTA CATAAAATTC ACGGTTCAAG ACCTTTATTA
ACTATGCTAA AGCGTATGGA GATGGAACCT ATTACGCCTG ACATTATGTT GAATAAAATT
AACGCATCAC TTTCAAGAGA AGTTTTGACA CATCATGTTG TGAGAAGAGC TTTAACTTAC
CTTGAAGATC ATATACCGAA TTTAGACGCA CGTTTCTTTA CTGTTGTACA TGGAGATGTT
AATCATAACA ACTGGTTATT ATCAGATCGG GATGAACTTT ACCTTGTGGA TTGGGAAGGT
GCAATGATTG CAGACCCAGC GATTGACATT GGTATGCTGC TTTACAATTA CGTTCCTCAA
AACAAATGGT CTCAGTGGTT TAAAACTTAT GGCGTTGAAG AAAGTGTCAA TTTGAATAAA
CGTATGAAAT GGTACACAGT TATTCAAGCA ATAGGTCTTA TTCAATGGTA TGAAGAACAA
AAACGCTATA GAGATATGAA TACATGGCTG AAATTTTTAA ATGAAGTAAT GAATAGTAAC
TTATTTATAT AA
|
|---|
| Protein sequence | MEQFYQLGWT LDSAGGASGE AYMAEQDGQK LFLKRNSNPF IAALSAEGIV PKLVWTKRIE
TGEVVTAQHW KNGRELNEDE MNQTRVAELL HKIHGSRPLL TMLKRMEMEP ITPDIMLNKI
NASLSREVLT HHVVRRALTY LEDHIPNLDA RFFTVVHGDV NHNNWLLSDR DELYLVDWEG
AMIADPAIDI GMLLYNYVPQ NKWSQWFKTY GVEESVNLNK RMKWYTVIQA IGLIQWYEEQ
KRYRDMNTWL KFLNEVMNSN LFI
|
|---|
| |