Gene SERP1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1292 
Symbol 
ID3241435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1337253 
End bp1338491 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content34% 
IMG OID637167941 
Productserine protease HtrA, putative 
Protein accessionYP_188864 
Protein GI57867254 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAC AAGAAAAGAA TCAACACCAC TATCGTAATT CTTCACAGAA GCGACACACT 
TTTCCATGGA TTAAAACAAT TATTGTTGCA ATAATCGCTG GAATTATTGG AGCACTTCTC
GTCTTAGGTA TTGGTAAACT CCTAAATAAA AATGGTTTTA ACAATGAAAG TGCTACTGTT
CATCAAGTTT CAAATAGTCA TGGTGGCAAT CAGTTAGATG GTAAAAGTAA TCAATACAAA
TCAGTACATG ACATGATTAA AGACGTTTCT CCCGCAATTG TCGGCGTGAT AAACATGCAA
AAATCTACAA ACCTTGATGA TTTATTCAAC GGTAAGGCAT CTAAATCAAA AGAAGCGGGA
ATTGGTTCCG GTGTGATTTA TCAAATAAGT GAAGGTTCCG CATATATCGT TACAAATAAT
CACGTTGTTG ATGGTGCTTC GGAAATTAAA GTTCAACTAC ATAATTCAAA ACAAGTAGAT
GCCAAATTAA TAGGTAAAGA CGCCCTAACA GATATTGCTG TTCTAAAAAT AAAAGATACA
AAAGGAATAA AAGCAATTCA ATTTGCTAAT TCGTCAAAAG TTCAAACAGG AGATAGTGTT
TTTGCAATGG GTAATCCTCT AGGATTAGAA TTTGCAAATT CTGTTACATC AGGAATTATT
TCAGCTAGCG AACGTACAAT TGACGCCAAT ACTTCTGCTG GTAATACTAA AGTTAATGTT
TTACAGACAG ACGCTGCAAT AAATCCCGGT AATTCGGGTG GTGCATTAGT GGATATTAAC
GGAAATCTCG TTGGTATCAA TTCCATGAAA ATTGCGGCAG CACAAGTAGA AGGTATAGGT
TTTGCTATAC CTAGTAATGA AGTTAGAGTG ACCATCGAAC AACTCGTTAA ACATGGTAAA
ATCGAACGCC CTTCAATCGG TATAGGTCTT ATAAATTTAA GTGATATTCC TGAAAACTAT
CGTAAAGAAC TACATACTCA TAAAGACAAA GGCGTTTATG TAGCTAAAGT AGACAGTGAA
AATGCCATTA AAAAGGGTGA TATTATTACT GGAATAGATG GTAAACAAAT AAAAGATGAT
ACAGATTTAA GAACTTATTT ATACGAGAGC AAAAAACCAG GTGAAACGGT TACTCTAAAA
GTTATCAGAG ATGGTAAGAC ACAAGACATT AATGTAAAAT TAAAAAAACA AGCATCTGCA
TCTGAATCAT CTCAATCACA AAGTCAATTT GCTCAATAA
 
Protein sequence
MSEQEKNQHH YRNSSQKRHT FPWIKTIIVA IIAGIIGALL VLGIGKLLNK NGFNNESATV 
HQVSNSHGGN QLDGKSNQYK SVHDMIKDVS PAIVGVINMQ KSTNLDDLFN GKASKSKEAG
IGSGVIYQIS EGSAYIVTNN HVVDGASEIK VQLHNSKQVD AKLIGKDALT DIAVLKIKDT
KGIKAIQFAN SSKVQTGDSV FAMGNPLGLE FANSVTSGII SASERTIDAN TSAGNTKVNV
LQTDAAINPG NSGGALVDIN GNLVGINSMK IAAAQVEGIG FAIPSNEVRV TIEQLVKHGK
IERPSIGIGL INLSDIPENY RKELHTHKDK GVYVAKVDSE NAIKKGDIIT GIDGKQIKDD
TDLRTYLYES KKPGETVTLK VIRDGKTQDI NVKLKKQASA SESSQSQSQF AQ