Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1292 |
Symbol | |
ID | 3241435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1337253 |
End bp | 1338491 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167941 |
Product | serine protease HtrA, putative |
Protein accession | YP_188864 |
Protein GI | 57867254 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAAC AAGAAAAGAA TCAACACCAC TATCGTAATT CTTCACAGAA GCGACACACT TTTCCATGGA TTAAAACAAT TATTGTTGCA ATAATCGCTG GAATTATTGG AGCACTTCTC GTCTTAGGTA TTGGTAAACT CCTAAATAAA AATGGTTTTA ACAATGAAAG TGCTACTGTT CATCAAGTTT CAAATAGTCA TGGTGGCAAT CAGTTAGATG GTAAAAGTAA TCAATACAAA TCAGTACATG ACATGATTAA AGACGTTTCT CCCGCAATTG TCGGCGTGAT AAACATGCAA AAATCTACAA ACCTTGATGA TTTATTCAAC GGTAAGGCAT CTAAATCAAA AGAAGCGGGA ATTGGTTCCG GTGTGATTTA TCAAATAAGT GAAGGTTCCG CATATATCGT TACAAATAAT CACGTTGTTG ATGGTGCTTC GGAAATTAAA GTTCAACTAC ATAATTCAAA ACAAGTAGAT GCCAAATTAA TAGGTAAAGA CGCCCTAACA GATATTGCTG TTCTAAAAAT AAAAGATACA AAAGGAATAA AAGCAATTCA ATTTGCTAAT TCGTCAAAAG TTCAAACAGG AGATAGTGTT TTTGCAATGG GTAATCCTCT AGGATTAGAA TTTGCAAATT CTGTTACATC AGGAATTATT TCAGCTAGCG AACGTACAAT TGACGCCAAT ACTTCTGCTG GTAATACTAA AGTTAATGTT TTACAGACAG ACGCTGCAAT AAATCCCGGT AATTCGGGTG GTGCATTAGT GGATATTAAC GGAAATCTCG TTGGTATCAA TTCCATGAAA ATTGCGGCAG CACAAGTAGA AGGTATAGGT TTTGCTATAC CTAGTAATGA AGTTAGAGTG ACCATCGAAC AACTCGTTAA ACATGGTAAA ATCGAACGCC CTTCAATCGG TATAGGTCTT ATAAATTTAA GTGATATTCC TGAAAACTAT CGTAAAGAAC TACATACTCA TAAAGACAAA GGCGTTTATG TAGCTAAAGT AGACAGTGAA AATGCCATTA AAAAGGGTGA TATTATTACT GGAATAGATG GTAAACAAAT AAAAGATGAT ACAGATTTAA GAACTTATTT ATACGAGAGC AAAAAACCAG GTGAAACGGT TACTCTAAAA GTTATCAGAG ATGGTAAGAC ACAAGACATT AATGTAAAAT TAAAAAAACA AGCATCTGCA TCTGAATCAT CTCAATCACA AAGTCAATTT GCTCAATAA
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Protein sequence | MSEQEKNQHH YRNSSQKRHT FPWIKTIIVA IIAGIIGALL VLGIGKLLNK NGFNNESATV HQVSNSHGGN QLDGKSNQYK SVHDMIKDVS PAIVGVINMQ KSTNLDDLFN GKASKSKEAG IGSGVIYQIS EGSAYIVTNN HVVDGASEIK VQLHNSKQVD AKLIGKDALT DIAVLKIKDT KGIKAIQFAN SSKVQTGDSV FAMGNPLGLE FANSVTSGII SASERTIDAN TSAGNTKVNV LQTDAAINPG NSGGALVDIN GNLVGINSMK IAAAQVEGIG FAIPSNEVRV TIEQLVKHGK IERPSIGIGL INLSDIPENY RKELHTHKDK GVYVAKVDSE NAIKKGDIIT GIDGKQIKDD TDLRTYLYES KKPGETVTLK VIRDGKTQDI NVKLKKQASA SESSQSQSQF AQ
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