Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1290 |
Symbol | |
ID | 3241433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1334668 |
End bp | 1336140 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167939 |
Product | PTS system, IIBC components |
Protein accession | YP_188862 |
Protein GI | 57867252 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [COG1264] Phosphotransferase system IIB components |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAC TTTTGCAACA TTTGGGTAGG TCTCTCATGT TACCTGTAGC AGTTCTGCCA GCAGCCGCAA TTATTGTAGG CATAGGTCAT GTTTTAGATG CTTTAAATAT ACTTCCTCAA GCTGCACTCT TTTTCACAAG TGTTGGGACC ACTATATTAG AGCAATTAGG TATATTATTT GCTATTGGTG TAGCTATCGG TATGGCTAAG AAGAATGATG GCGCAGTAGC ATTAGCGGCA GCGTTAGGAT TTTTTATAGT TACAGTAGTA CTATCTCCAG AAAAATTAGC AACTTTGTTA CAAATTAAAG AATCTAAAAT TGATTTAGCA TTCAGTCAAA TGAATAATGG AAATGTGTTT GTAGGGATTA TTATAGGTTT GATTGCTGCA TATAGTTATA ACAAATTTAG TGAAACGAAT TTACCTATGG CCTTATCATT CTTCAGTGGG AAACGACTTG TTCCAATCAT GACAGCATTC TTTTGTACAA TTTTAGCGAT TATTTTATTA TTGATTTGGC CTCCAGTTTA TAATGGGATA GTTACTTTTG GTAAGTGGAT TGTTGGTATG GGTCCATTCG GTGCATTATT ATATGGTTTT TTTAATAGAT TGTTAATACC TACTGGGTTG CATCATGCGC TCAATAATGT ATTTTGGTTT GATACTGCTG GAATAAATGA CATAGGTAAA TTTCAAAGTG GTAAAAATGC CATTAAGGGA ATTACTGGCA GATACCAAGC AGGATTTTTC CCTGTTATGA TGTTTGGTGT ACCGGCAGCA GCTTTGGCGA TGTATCATAC TGCAAAGACG AATCAAAAAA AACAAGTTTA TGCTTGGTTT TTAGCAAGTT CAGTTTCGGC ATTCTTTGTG GGTGTAACTG AACCCATAGA GTTTGCATTC ATGTTTGTAG CTCCAGTTTT ATTTGTTATT CATGCTGTTT TAACTGGATT ATCATTATTT ATAGCAGCAA TGTTTCATTG GACAGCAGGA TTTTCATTTA GTGCAGGTCT TATAGATTAT GTGCTTTCAT TGGTTAATCC GATATCTAAT CAACCTTGGA TGTTATTATT GCAGGGTGTA GTCTTTTTTA TTATCTATTA CGTTATCTTT AGAGTTGTCA TACAAGTCTT TAATTTAAGT ACTATAGGTA GGGGAGATAA TGAACTTATC GATCCAACAT CAAATGATAC TTCTGAAATG GAAGTATTAC AGAACAAAAC CACTACAAGT AAATATTATC AAAACGCAAA ACGTATTTTA GACGGATTAG GTGGTAAAGA AAACATTATT AGTTTAAATC ATTGTGCAAC AAGGCTTAGA TTGGAGCTTA AAGATAATTC GATTATAGAT GAGCAGAAAA TTAAAAATGC TGGAGCTATT GGTATAACTC AAAATGGACA CCATTATACC CAAGTGATTA TTGGAACACA CGTACAACAA GTTGCCAATG AAATGGATCA CCAAATGAAT TAG
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Protein sequence | MYKLLQHLGR SLMLPVAVLP AAAIIVGIGH VLDALNILPQ AALFFTSVGT TILEQLGILF AIGVAIGMAK KNDGAVALAA ALGFFIVTVV LSPEKLATLL QIKESKIDLA FSQMNNGNVF VGIIIGLIAA YSYNKFSETN LPMALSFFSG KRLVPIMTAF FCTILAIILL LIWPPVYNGI VTFGKWIVGM GPFGALLYGF FNRLLIPTGL HHALNNVFWF DTAGINDIGK FQSGKNAIKG ITGRYQAGFF PVMMFGVPAA ALAMYHTAKT NQKKQVYAWF LASSVSAFFV GVTEPIEFAF MFVAPVLFVI HAVLTGLSLF IAAMFHWTAG FSFSAGLIDY VLSLVNPISN QPWMLLLQGV VFFIIYYVIF RVVIQVFNLS TIGRGDNELI DPTSNDTSEM EVLQNKTTTS KYYQNAKRIL DGLGGKENII SLNHCATRLR LELKDNSIID EQKIKNAGAI GITQNGHHYT QVIIGTHVQQ VANEMDHQMN
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