Gene SERP1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1290 
Symbol 
ID3241433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1334668 
End bp1336140 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content34% 
IMG OID637167939 
ProductPTS system, IIBC components 
Protein accessionYP_188862 
Protein GI57867252 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAC TTTTGCAACA TTTGGGTAGG TCTCTCATGT TACCTGTAGC AGTTCTGCCA 
GCAGCCGCAA TTATTGTAGG CATAGGTCAT GTTTTAGATG CTTTAAATAT ACTTCCTCAA
GCTGCACTCT TTTTCACAAG TGTTGGGACC ACTATATTAG AGCAATTAGG TATATTATTT
GCTATTGGTG TAGCTATCGG TATGGCTAAG AAGAATGATG GCGCAGTAGC ATTAGCGGCA
GCGTTAGGAT TTTTTATAGT TACAGTAGTA CTATCTCCAG AAAAATTAGC AACTTTGTTA
CAAATTAAAG AATCTAAAAT TGATTTAGCA TTCAGTCAAA TGAATAATGG AAATGTGTTT
GTAGGGATTA TTATAGGTTT GATTGCTGCA TATAGTTATA ACAAATTTAG TGAAACGAAT
TTACCTATGG CCTTATCATT CTTCAGTGGG AAACGACTTG TTCCAATCAT GACAGCATTC
TTTTGTACAA TTTTAGCGAT TATTTTATTA TTGATTTGGC CTCCAGTTTA TAATGGGATA
GTTACTTTTG GTAAGTGGAT TGTTGGTATG GGTCCATTCG GTGCATTATT ATATGGTTTT
TTTAATAGAT TGTTAATACC TACTGGGTTG CATCATGCGC TCAATAATGT ATTTTGGTTT
GATACTGCTG GAATAAATGA CATAGGTAAA TTTCAAAGTG GTAAAAATGC CATTAAGGGA
ATTACTGGCA GATACCAAGC AGGATTTTTC CCTGTTATGA TGTTTGGTGT ACCGGCAGCA
GCTTTGGCGA TGTATCATAC TGCAAAGACG AATCAAAAAA AACAAGTTTA TGCTTGGTTT
TTAGCAAGTT CAGTTTCGGC ATTCTTTGTG GGTGTAACTG AACCCATAGA GTTTGCATTC
ATGTTTGTAG CTCCAGTTTT ATTTGTTATT CATGCTGTTT TAACTGGATT ATCATTATTT
ATAGCAGCAA TGTTTCATTG GACAGCAGGA TTTTCATTTA GTGCAGGTCT TATAGATTAT
GTGCTTTCAT TGGTTAATCC GATATCTAAT CAACCTTGGA TGTTATTATT GCAGGGTGTA
GTCTTTTTTA TTATCTATTA CGTTATCTTT AGAGTTGTCA TACAAGTCTT TAATTTAAGT
ACTATAGGTA GGGGAGATAA TGAACTTATC GATCCAACAT CAAATGATAC TTCTGAAATG
GAAGTATTAC AGAACAAAAC CACTACAAGT AAATATTATC AAAACGCAAA ACGTATTTTA
GACGGATTAG GTGGTAAAGA AAACATTATT AGTTTAAATC ATTGTGCAAC AAGGCTTAGA
TTGGAGCTTA AAGATAATTC GATTATAGAT GAGCAGAAAA TTAAAAATGC TGGAGCTATT
GGTATAACTC AAAATGGACA CCATTATACC CAAGTGATTA TTGGAACACA CGTACAACAA
GTTGCCAATG AAATGGATCA CCAAATGAAT TAG
 
Protein sequence
MYKLLQHLGR SLMLPVAVLP AAAIIVGIGH VLDALNILPQ AALFFTSVGT TILEQLGILF 
AIGVAIGMAK KNDGAVALAA ALGFFIVTVV LSPEKLATLL QIKESKIDLA FSQMNNGNVF
VGIIIGLIAA YSYNKFSETN LPMALSFFSG KRLVPIMTAF FCTILAIILL LIWPPVYNGI
VTFGKWIVGM GPFGALLYGF FNRLLIPTGL HHALNNVFWF DTAGINDIGK FQSGKNAIKG
ITGRYQAGFF PVMMFGVPAA ALAMYHTAKT NQKKQVYAWF LASSVSAFFV GVTEPIEFAF
MFVAPVLFVI HAVLTGLSLF IAAMFHWTAG FSFSAGLIDY VLSLVNPISN QPWMLLLQGV
VFFIIYYVIF RVVIQVFNLS TIGRGDNELI DPTSNDTSEM EVLQNKTTTS KYYQNAKRIL
DGLGGKENII SLNHCATRLR LELKDNSIID EQKIKNAGAI GITQNGHHYT QVIIGTHVQQ
VANEMDHQMN