| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1288 |
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| Symbol | serA |
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| ID | 3241426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 1331773 |
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| End bp | 1333368 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637167937 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_188860 |
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| Protein GI | 57867245 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.605181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATA AGATATTAGT ATCAGACCCA ATTTCTGAGG ATGGTTTACA AAGTATTTTA
AAACATCCAG AATTTGACGT AGATATACAA ACAGATTTAT CTGAAAATGA TTTAGTAAAT
ATGATTTCAA CTTATGATGC TCTTATCGTA CGAAGTCAAA CCCAAGTAAC AGAGCGAATT
ATTAATGCTG CAACAAATTT GAAGGTCATT GCAAGAGCTG GTGTAGGTGT GGATAATATT
AATATAGAAG CAGCGACTTT AAAAGGTATT TTAGTAATTA ATGCTCCTGA TGGTAATACA
ATTTCTGCTA CAGAACATTC AGTAGCTATG TTGCTTGCAA TGGCACGAAA TATTCCTCAA
GCACACCAAT CTTTACGTAA CAAAGAATGG AATCGTAAAG CATTTAGAGG GGTTGAACTT
TATGGCAAAA CCTTAGGTGT TATCGGTGCT GGTAGGATTG GTTTGGGCGT CGCTAAACGT
GCGCAGAGTT TCGGTATGAA AATTTTAGCG TTCGATCCTT ATTTAACAGA AGATAAAGCG
AAGTCATTAG ATATTCAAAT TGCAACTGTT GATGAAATTG CCGAAAAATC CGACTTTGTA
ACAGTTCACA CACCATTAAC ACCTAAAACT CGAGGAATTG TTGGTTCATC TTTCTTTAAC
AAAGCTAAAC AAAACTTACA AATCATAAAT GTTGCCAGAG GGGGTATTAT AGATGAAACT
GCACTTATTG AAGCATTAGA TAATAACTTA ATAGATCGTG CAGCTATTGA CGTATTTGAA
CATGAACCTC CTACTGATTC CCCTCTCATT CAACATGATA AAATTATTGT CACACCACAT
CTTGGCGCCT CTACTGTAGA AGCGCAAGAG AAGGTTGCAG TCTCTGTATC TGAAGAAATA
ATTGAAATTC TAACTAAAGG GAATGTTGAG CATGCTGTGA ATGCTCCAAA AATGGATTTA
AGCAAAGTTG ATAAAACAAC TCAAAGCTTT ATAGGTTTAA GTACAACTAT TGGTGAGTTT
GCTATTCAGC TTCTCGATGG TGCTCCGAGT GAAATTAAAG TTAAATATGC TGGTGACTTA
GCGCAAAATG ACACTAGTTT AATTACAAGA ACAATTATAA CGAACATCTT GAAAGAAGAT
TTAGGTAATG AAGTCAATAT TATTAATGCA TTAGCAATAC TTAACCAACA AGGTGTCACG
TATAATATAG AAAAACAAAA GAAACATTCT GGCTTTAGTA GTTACATTGA GCTAGAACTA
GTTAATGATC AAGATAAAAT CAAAATTGGC GCAACGGTAT TCGCAGGTTT TGGCCCAAGA
ATAGTACGTA TTAATGATTA CTCACTTGAT TTTAAACCTA ACCAATATCA ATTAGTAACA
TGTCATAAAG ATAAACCTGG TATAGTAGGA CAAACAGGCA ACCTATTGGG AAGTCACGGA
ATTAATATTG CGTCAATGAC TTTAGGACGT AACGATGCTG GTGGAGATGC TTTAATGATT
CTTTCTATTG ATCAACAAGC AAGTGAGGAA GTTATAAAAA TTTTAAATGA AACAAGCGGA
TTCAACAAAA TTATTAGCAC TAAGTTAACA ATTTGA
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| Protein sequence | MSHKILVSDP ISEDGLQSIL KHPEFDVDIQ TDLSENDLVN MISTYDALIV RSQTQVTERI
INAATNLKVI ARAGVGVDNI NIEAATLKGI LVINAPDGNT ISATEHSVAM LLAMARNIPQ
AHQSLRNKEW NRKAFRGVEL YGKTLGVIGA GRIGLGVAKR AQSFGMKILA FDPYLTEDKA
KSLDIQIATV DEIAEKSDFV TVHTPLTPKT RGIVGSSFFN KAKQNLQIIN VARGGIIDET
ALIEALDNNL IDRAAIDVFE HEPPTDSPLI QHDKIIVTPH LGASTVEAQE KVAVSVSEEI
IEILTKGNVE HAVNAPKMDL SKVDKTTQSF IGLSTTIGEF AIQLLDGAPS EIKVKYAGDL
AQNDTSLITR TIITNILKED LGNEVNIINA LAILNQQGVT YNIEKQKKHS GFSSYIELEL
VNDQDKIKIG ATVFAGFGPR IVRINDYSLD FKPNQYQLVT CHKDKPGIVG QTGNLLGSHG
INIASMTLGR NDAGGDALMI LSIDQQASEE VIKILNETSG FNKIISTKLT I
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