Gene SERP1284 details

Gene Information

• Locus tag: SERP1284
• Symbol: rpsD
• ID: 3241422
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 1328357
• End bp: 1328959
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637167933
• Product: 30S ribosomal protein S4
• Protein accession: YP_188856
• Protein GI: 57867241
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00000240031
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGAT TCAGAGGTTC AAACTGGAAA AAATCTCGTC GTTTAGGTAT CTCATTAAGC 
GGTACTGGTA AAGAATTAGA AAAACGACCA TATGCACCAG GACAACACGG TCCTAACCAA 
CGTAAAAAAT TATCAGAATA TGGTTTACAA TTACGTGAAA AACAAAAATT ACGTTACTTA 
TATGGAATGA CTGAAAGACA ATTCCGTAAC ACATTTGATA TTGCTGGTAA GCAATATGGT 
GTACACGGTG AAAACTTCAT GATTTTACTT GCTAGTCGTT TAGATGCAGT TGTTTATTCA 
TTAGGTTTAG CTCGTACACG TCGTCAAGCA CGTCAATTAG TAAACCACGG TCACATTGAA 
GTGGATGGTG GACGCGTAGA CATCCCATCT TACTCATTAA AACCTGGTCA AGTGATTACA 
GTTCGTGAAA AATCACAAAA CTTAGATATT ATTAAAGAAT CTGTTGAAAT TAACAATTTC 
GTACCAGAAT ATTTAGACTT CGATGCTGAC AACTTAAAAG GTACTTTCGT TCGATTCCCT 
GAACGTAGCG AGTTACCAGC TGAAATCAAT GAACAATTAA TCGTTGAGTA CTACTCAAGA 
TAA 

 

Protein sequence

MARFRGSNWK KSRRLGISLS GTGKELEKRP YAPGQHGPNQ RKKLSEYGLQ LREKQKLRYL 
YGMTERQFRN TFDIAGKQYG VHGENFMILL ASRLDAVVYS LGLARTRRQA RQLVNHGHIE 
VDGGRVDIPS YSLKPGQVIT VREKSQNLDI IKESVEINNF VPEYLDFDAD NLKGTFVRFP 
ERSELPAEIN EQLIVEYYSR