Gene SERP1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1272 
Symbolald 
ID3241718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1316789 
End bp1317904 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content36% 
IMG OID637167922 
Productalanine dehydrogenase 
Protein accessionYP_188845 
Protein GI57867221 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG GGATTCCTAA AGAAATAAAG AATAATGAGA ATCGAGTGGG GTTATCCCCA 
AGTGGTGTAC ATGCACTTGT AGACCAAGGA CATGAAGTTT TAGTAGAAAC AAATGCTGGT 
CTAGGATCTT ACTTTGAAGA TGGTGATTAT CAAGAAGCCG GTGCCAAAAT TGTTGATGAG 
CAGTCAAAAG CTTGGGATGT TGATATGGTC ATCAAAGTTA AAGAACCACT TGAATCGGAA 
TACAAATTCT TTAAAGAAGA GTTAATCTTA TTTACTTATT TACACCTTGC GAATGAACAG 
AAATTAACTC AGGCACTTGT GGACAACAAG GTTATATCTA TTGCCTATGA AACTGTACAA 
TTACCAGACG GTTCTTTACC GTTATTAACA CCAATGAGTG AAGTGGCTGG TAGAATGTCT 
ACACAAGTGG GAGCTGAATT TTTACAAAGA TTTAATGGAG GTATGGGTAT CTTACTAGGT 
GGCATACCTG GAGTACCTAA AGGCAAAGTC ACTATCATTG GTGGTGGTCA AGCAGGTACA 
AATGCAGCTA AGATAGCTTT AGGATTGGGA GCTGAAGTGA CAATACTAGA TGTTAATCCT 
AAACGTTTAG AAGAATTAGA GGACTTATTT GATGGCAGAG TAAGAACAAT TATGTCTAAT 
CCATTAAATA TAGAAATGTA TGTGAAAGAA AGCGATTTAG TGATTGGAGC AGTCCTTATT 
CCAGGTGCTA AAGCTCCAAA CTTAGTGACT GAAGATATGA TAAAAGAAAT GAAAGATGGA 
TCAGTGATTG TAGATATTGC GATAGATCAA GGTGGAATTT TTGAAACAAC TGATAAGATT 
ACTACTCATG ATAATCCGAC TTACACTAAA CATGGTGTCG TGCATTATGC TGTAGCTAAT 
ATGCCAGGTG CCGTTCCACG TACATCTACA ATTGGATTGA ACAATGCAAC ATTACCTTAT 
GCGCAATTAT TGGCTAATAA AGGTTATCGT GAAGCATTTA AAGTAAATCA TCCATTATCT 
CTAGGTCTGA ATACATTTAA TGGACATGTG ACTAATAAGA ATGTAGCTGA TACATTTAAT 
TTTGAATACA CTTCAATTGA AGATGCATTG AAATAA
 
Protein sequence
MKIGIPKEIK NNENRVGLSP SGVHALVDQG HEVLVETNAG LGSYFEDGDY QEAGAKIVDE 
QSKAWDVDMV IKVKEPLESE YKFFKEELIL FTYLHLANEQ KLTQALVDNK VISIAYETVQ 
LPDGSLPLLT PMSEVAGRMS TQVGAEFLQR FNGGMGILLG GIPGVPKGKV TIIGGGQAGT 
NAAKIALGLG AEVTILDVNP KRLEELEDLF DGRVRTIMSN PLNIEMYVKE SDLVIGAVLI 
PGAKAPNLVT EDMIKEMKDG SVIVDIAIDQ GGIFETTDKI TTHDNPTYTK HGVVHYAVAN 
MPGAVPRTST IGLNNATLPY AQLLANKGYR EAFKVNHPLS LGLNTFNGHV TNKNVADTFN 
FEYTSIEDAL K