| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1266 |
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| Symbol | dnaE |
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| ID | 3241705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1308406 |
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| End bp | 1311603 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637167916 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_188839 |
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| Protein GI | 57867208 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.502736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGCAC ATTTAAATAT TCATACTTCT TTTGACCTGT TAGATTCTAG TTTAAGAATT
GATGCATTAA TAGATAAAGC TAAAAAAGAA GGATATCGTG CGCTTGCAAT AACCGATACA
AATGTATTGT ACGGTTATCC AAAGTTTTAT GATGCTTGTA TTGCAGCTCA CATACATCCA
ATCTTTGGTA TGACTATATA TTTAACGGAT GGTCTCTATA CTATTGAAAC GGTTGTTTTA
GCAAAAAATA ATCAAGGACT CAAGTCATTA TATCAACTTT CTTCTGCTAT AATGATGAGA
AATAAAGAAG AAGTGCCAAT TGAATGGCTA AAAAGATACG ACGAACATTT AATTATCATA
TTTAAAGAGG CTGAGTTGTC TCATAAGCAA GTTATTGATG CTTTTGAAGG TAAGAAAGAA
TTATATTTAA ATCACAATAG TAATAATACA TTGACTGGCA AACGTGTATG GATGCAATCT
GCAAGATACT TAAATGAAGA TGATGCTGAA ACCATTCCAG CGTTACATGC CATAAGAGAT
AATACTAAGT TAGATTTAAT ACATGAGAAA GAAACACTTG ATGAACATTT TCCTAGTATA
GAAGAACTTC AAACACTAAA TCTTAGTGAA GATATGATTA CTAACGCGAA TGAAATTGAA
GAATTATGCC AAGCAGAAAT TGCATACCAT CAATCCCTGT TGCCACAATT TGTGACACCT
AATGGTGAAA CTTCGAAAGA TTATCTTTGG ACGATACTTA TACATAGGTT ACGAGAATGG
GAACTTAATG ATAAAACTTA TTTCAATCGG TTGAAACATG AATATAAAAT TATTACTGAT
ATGGGTTTCG AGGATTATTT TCTTATTGTA AGTGATTTGA TTCATTTTGC TAAAACACAT
GAAGTGATGG TTGGGCCAGG TCGTGGTTCA TCAGCAGGGT CATTAGTAAG TTATTTATTA
GGTATTACTA CTATAGACCC GTTAAAATAT AATCTTTTAT TTGAAAGATT TCTTAATCCT
GAACGCGTAA CTATGCCAGA TATTGATATT GATTTTGAAG ACACGAGACG TGAAAAAGTA
ATTAAGTATG TACAAGATAA ATATGGTGAA CATCATGTAT CAGGTATTGT GACATTTGGG
CATCTGTTAG CTCGTGCTGT TGCTAGAGAT GTAGGAAGAA TAATGGGATT TGATGAAACG
AGTTTAAATG AGATTTCAAA ACTTATTCCA CATAAATTAG GTATAACTCT TGAAGAAGCA
TACCAAAAGC CAGAGTTTAA AGCATTTGTT CATCGTAATC ATAGAAATGA ACGTTGGTTT
GAAGTGAGTA AAAAGTTAGA GGGATTACCA AGACATACGT CTACGCATGC TGCAGGTATC
ATTATCAATG ATCAACCATT ATTCAAATTT GCCCCATTAA CAACTGGTGA TACAGGATTA
TTAACGCAGT GGACTATGAC AGAAGCGGAA CGTATAGGAT TATTAAAAAT TGATTTCTTG
GGATTACGCA ATCTATCAAT TATTCATCAA ATTATTTTAC AAGTTAAAAA GGATTTAAAT
ATAAATATTG ATATAGAAGC TATACCTTAT GATGATAAAA AAGTTTTTGA TTTATTATCA
AACGGTGACA CTACAGGTAT ATTTCAATTG GAATCAGACG GTGTTAGAAG CGTATTAAAA
AGATTGCAAC CCGAACATTT TGAAGATATC GTAGCTGTCA CATCATTATA TAGACCAGGA
CCAATGGAAG AAATATCAAC TTATATAACC CGTAGACATA ATCCTAACCA AGTTGCTTAT
TTACATCCAG ATTTAGAACC AATCTTAAAA AACACATATG GTGTTATCAT TTATCAAGAA
CAAATAATGC TAATAGCAAG TCAAGTTGCT GGTTTTAGTT ATGGTGAAGC AGATATTTTA
AGAAGGGCAA TGAGTAAAAA GAATCGTGCA ATCTTAGAAA GTGAGCGTCA ACATTTCATT
GATGGTGCAA AAAATAACGG TTACGATGAA CAGATAAGTA AGCAAATTTT TGATTTAATA
CTTAAGTTTG CAGATTATGG GTTCCCACGT GCCCATGCTG TTAGTTACTC AAAAATTGCA
TACATTATGA GCTATTTAAA AGTGCACTAT CCTCATTATT TTTATGCAAA TATCTTGAGT
AATGTAATAG GAAGTGAAAA AAAGACTGCA GCTATGATTG ACGAAGCTAA GCACCAAAGA
ATTAGCATCT TGCCTCCCAA TATTAATCAA AGTCATTGGT ATTATAAGGC AAGTAATAAA
GGAATATATC TGTCTTTAGG TACAATTAAA GGAATTGGAT ATCAAAGCGT TAAATTAATT
ATTGATGAAC GTCAGCAGAA TGGACCTTAT AGAGATTTCT TTGATTTTTC AAGACGTATA
CCAAAAAGGG TGAAAAATAG AAAATTACTT GAGTCTCTTA TCTTAGTAGG CGCATTCGAC
ACTTTTGGCA AAACTAGAGC GACATTATTA CAAGCAATTG ATCAAGTATT AGATTTGAAT
TCTGATGTTG AGCAAGATGA AATGCTTTTC GATCTTTTAA CTCCTAAACA ATCGTATGAA
GAAAAAGAGG AACTACCTGA TCAATTATTA AGTGATTATG AAAAAGAATA CCTAGGATTC
TATATTAGTA AACATCCAGT TGAAAAGAAA TTTGAAAAGA AACAATATTT AGGCATATTT
CAATTGTCTA ATGGAAGTCA CTACCAACCT ATACTTGTTC AATTTGACCA TATCAAACAA
ATAAGAACGA AGAATGGTCA AAATATGGCA TTTGTAACGA TGAATGATGG AAGAACGATG
ATGGATGGAG TGATTTTCCC AGATAAGTTT AAAAAATACG AAACTTCTAT TTCAAAGGAA
CAGATGTATA TCGTATTAGG TAAATTTGAA AAGCGTAACC AACAAATGCA ACTTATCATC
AATCAACTTT TTGAAGTTGA AGCGTATGAG CAAACAAAAT TGTCTAATTC GAAAAAAGTT
ATTTTACGTA ATGTAACACA TCTAGAACCA CAATTTGAAC ATTCAAAAGT AGAATCTAAT
GAACAACATG CATTAAATAT TTATGGTTTT GACGAAAGTG CAAATAAGAT GACAATGTTG
GGACAAATTG AACGTCAACG TCAAAATTTT GATCTATTAA TACAAACTTA TTCGCCAGCT
GATATTAGAT TTATTTAA
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| Protein sequence | MVAHLNIHTS FDLLDSSLRI DALIDKAKKE GYRALAITDT NVLYGYPKFY DACIAAHIHP
IFGMTIYLTD GLYTIETVVL AKNNQGLKSL YQLSSAIMMR NKEEVPIEWL KRYDEHLIII
FKEAELSHKQ VIDAFEGKKE LYLNHNSNNT LTGKRVWMQS ARYLNEDDAE TIPALHAIRD
NTKLDLIHEK ETLDEHFPSI EELQTLNLSE DMITNANEIE ELCQAEIAYH QSLLPQFVTP
NGETSKDYLW TILIHRLREW ELNDKTYFNR LKHEYKIITD MGFEDYFLIV SDLIHFAKTH
EVMVGPGRGS SAGSLVSYLL GITTIDPLKY NLLFERFLNP ERVTMPDIDI DFEDTRREKV
IKYVQDKYGE HHVSGIVTFG HLLARAVARD VGRIMGFDET SLNEISKLIP HKLGITLEEA
YQKPEFKAFV HRNHRNERWF EVSKKLEGLP RHTSTHAAGI IINDQPLFKF APLTTGDTGL
LTQWTMTEAE RIGLLKIDFL GLRNLSIIHQ IILQVKKDLN INIDIEAIPY DDKKVFDLLS
NGDTTGIFQL ESDGVRSVLK RLQPEHFEDI VAVTSLYRPG PMEEISTYIT RRHNPNQVAY
LHPDLEPILK NTYGVIIYQE QIMLIASQVA GFSYGEADIL RRAMSKKNRA ILESERQHFI
DGAKNNGYDE QISKQIFDLI LKFADYGFPR AHAVSYSKIA YIMSYLKVHY PHYFYANILS
NVIGSEKKTA AMIDEAKHQR ISILPPNINQ SHWYYKASNK GIYLSLGTIK GIGYQSVKLI
IDERQQNGPY RDFFDFSRRI PKRVKNRKLL ESLILVGAFD TFGKTRATLL QAIDQVLDLN
SDVEQDEMLF DLLTPKQSYE EKEELPDQLL SDYEKEYLGF YISKHPVEKK FEKKQYLGIF
QLSNGSHYQP ILVQFDHIKQ IRTKNGQNMA FVTMNDGRTM MDGVIFPDKF KKYETSISKE
QMYIVLGKFE KRNQQMQLII NQLFEVEAYE QTKLSNSKKV ILRNVTHLEP QFEHSKVESN
EQHALNIYGF DESANKMTML GQIERQRQNF DLLIQTYSPA DIRFI
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