Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1260 |
Symbol | |
ID | 3240852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1300307 |
End bp | 1301665 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167910 |
Product | amino acid permease family protein |
Protein accession | YP_188833 |
Protein GI | 57867186 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGA ATTTACAAAG AGAATTGAGC AATAGACATG TTCAATTAAT TGCCATCGGA GGTGCTATAG GAACTGGTCT GTTCCTAGGT GCCGGACAAA CTATCGCAAT GACTGGTCCC TCAATATTAC TTACTTATAT TATTATAGGG TTCATGTTAT TTATGTTCAT GCGTGGATTG GGAGAAATTA TTATTCAAAA TACGAATTTC AAATCTTTTG CTGACGTGAC CAACACATAT ATAGGACCGT TCGCAGGATT TGTAACGGGT TGGACTTACT GGCTATGTTG GATTATTACT GGTATGGCTG AAGTGACTGC AGTTGCCAAA TATATAAGTT TTTGGTTCCC AGACATACCT AATTGGATTA GTGCTTTATT CTGTGTACTT ATTCTAATGT CTTTCAATTT ATTAAGTGCA AAGTTGTTTG GTGAGCTTGA ATTCTGGTTC GCAATCATTA AAATAGTTAC AATCATTGCT TTAATCGTTA TAGGTGTAAT CATGATTTTA TTCGCATTCA AGACACCATT TGGTAACACA AGTTTAACTC ATTTGTATCA ACATGGAATT TTTCCAAAAG GAGCTTCTGG ATTCTTTATG TCATTCCAAA TGGCATTGTT CTCATTTGTT GGTATTGAAA TGATTGGTGT TACTGCAGGA GAGACAAAAG ATCCAGAAAA AACTATACCT AAAGCTATCA ATAGTGTACC TATTAGAATT TTAATCTTTT ATGTTGGTGC ATTAGCAGTC ATCATGTCCA TTATTCCATG GGATAAAGTA GATCCAGATA ATAGTCCATT CGTTAGATTG TTTGCATTAA TTGGTATACC GTTTGCAGCA GGAATAATTA ATTTCGTTGT TTTAACAGCT GCTGCCTCTT CATGTAACAG CGGTATTTTC TCAAACAGCA GAATGCTTTA TGGACTTTCA AACCAAAATC AAGCACCACC AACATTTGCT AGTACTAATA AACATGGTGT GCCACATAAA GCAATCATTG CATCATCAGC TTTATTGTTA ATTGCAGCAC TACTGAATTA CATATTCCCT GATGCAACAC TTGTATTTAC TTATGTTACT ACGATTTCTA CAGTATTGTT TGTTGTGGTT TGGGCATTAA TTATTATTGC TTATATTAAC TATAGTCGTA AAAATCCAGA ACTTCATAAG AAAGCGACAT ATAAACTACC AGGCGGTCAA TACATGGGAT ACCTTATACT TATTTTCTTT GTTTTTGTAT TTGCCTTGTT ATTTATAAAT GTTGATACAA GAAGAGCGAT TTACTGCACG CCTATTTGGT TTATTTTATT AGGTTTAATG TACTTAAGAT ACAAAAAAGC TGATAAAGAA GCACGATAA
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Protein sequence | MAENLQRELS NRHVQLIAIG GAIGTGLFLG AGQTIAMTGP SILLTYIIIG FMLFMFMRGL GEIIIQNTNF KSFADVTNTY IGPFAGFVTG WTYWLCWIIT GMAEVTAVAK YISFWFPDIP NWISALFCVL ILMSFNLLSA KLFGELEFWF AIIKIVTIIA LIVIGVIMIL FAFKTPFGNT SLTHLYQHGI FPKGASGFFM SFQMALFSFV GIEMIGVTAG ETKDPEKTIP KAINSVPIRI LIFYVGALAV IMSIIPWDKV DPDNSPFVRL FALIGIPFAA GIINFVVLTA AASSCNSGIF SNSRMLYGLS NQNQAPPTFA STNKHGVPHK AIIASSALLL IAALLNYIFP DATLVFTYVT TISTVLFVVV WALIIIAYIN YSRKNPELHK KATYKLPGGQ YMGYLILIFF VFVFALLFIN VDTRRAIYCT PIWFILLGLM YLRYKKADKE AR
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