Gene SERP1246 details

Gene Information

• Locus tag: SERP1246
• Symbol: thrS
• ID: 3241114
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1281592
• End bp: 1283529
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637167897
• Product: threonyl-tRNA synthetase
• Protein accession: YP_188820
• Protein GI: 57867165
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.1161
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAAA TTAATATTCA ATTTCCAGAT GGTAATACAA AAGAATTTGA TAAAGGGACT 
ACTACAGAAG ACATCGCTCA ATCAATTAGT CCAGGATTAA GAAAAAAAGC AGTTGCGGGA 
AAATTCAATG GTCAACTTGT AGATTTAACA CGCCCTTTAG AACAAGATGG AGCTATTGAA 
ATTATTACTC CTGGGAGTGA AGAAGCGTTA GAAGTACTTC GTCATTCAAC AGCTCATTTA 
ATGGCACAAG CATTAAAACG TTTATACGGA GACGTTAAAT TTGGAGTTGG ACCTGTAATA 
GAAGGCGGAT TCTATTATGA TTTTGATATG GATGATAAGG TTTCATCGGA TGATTTTGAT 
AAAATTGAGA AAACAATGAA ACAAATTGTG AACGAAAATC ATAAAATTGT AAGAGAAGTA 
GTTAGTAAAG AAAAAGCAAA AGACTTCTTC AAGGATGACC CTTATAAATT AGAACTTATT 
GATGCAATTC CTGAAGATGA GAGTGTAACA CTTTATACTC AAGGTGAATT TACTGATTTA 
TGTCGAGGTG TACACGTACC TTCTACTTCT AAAATTAAAG AGTTCAAACT ATTATCTACA 
GCTGGTGCTT ATTGGCGTGG AAATAGTGAT AATAAAATGT TACAACGAAT TTATGGTACA 
GCATTCTTTG ACAAAAAAGA TTTGAAAGCA CATCTAAAAA TGTTGGAAGA ACGTCGTGAG 
CGTGATCATC GTAAAATTGG TAAAGATTTA GAATTGTTTA CAAACAATCA ACTCGTTGGT 
GCTGGTTTAC CATTATGGTT ACCAAATGGT GCTACAATAC GTAGGGAAAT AGAACGTTAT 
ATTGTCGATA AAGAAGTAAG TATGGGATAC GATCATGTTT ACACACCAGT ATTAGCCAAT 
GTTGATTTAT ATAAAACATC TGGTCACTGG GATCATTATC AAGAAGATAT GTTCCCAGCA 
ATGAAGTTAG ATGAAGACGA AGCAATGGTC TTAAGACCAA TGAACTGTCC ACATCATATG 
ATGATTTATA AAAACAAACC TCATTCTTAT CGCGAATTAC CTATACGTAT TGCTGAATTG 
GGTACTATGC ATCGTTACGA AGCAAGTGGT GCAGTATCAG GTTTACAACG TGTTCGAGGA 
ATGACATTGA ATGATTCCCA TATTTTCGTT AGACCTGATC AAATTAAAGA AGAATTTAAA 
CGTGTAGTTA ATATGATTCA AGATGTGTAC AAAGATTTTG GTTTTGAAGA TTATCGCTTC 
AGATTGAGTT ATAGAGATCC TGAAGATAAG CATAAGTACT TTGATGATGA TGAAATGTGG 
GAAAAAGCTG AATCCATGCT TAAAGAAGCA TCAGATGAAT TAGGTTTAAC TTATGAAGAA 
GCTATTGGTG AGGCAGCATT CTATGGACCT AAGTTAGATG TTCAAGTAAA AACAGCTATG 
GGAAAAGAAG AAACTCTATC AACAGCACAA CTTGATTTTC TTTTACCAGA ACGTTTTGAC 
TTAACGTACA TTGGTCAAGA TGGAGAACAA CATCGTCCTG TAGTTATACA CCGTGGTGTA 
GTTTCTACTA TGGAACGTTT TGTTGCATTT TTAACAGAAG AAACAAAAGG TGCATTTCCA 
ACTTGGTTGG CGCCTATGCA AGTTGAAATT ATTCCTGTAA ATATAGATTT ACATTATGAT 
TATGCAAGAC TTTTACAAGA TGAACTAAAA TCGCAAGGTG TCCGCGTTGA AATTGATGAC 
CGTAATGAAA AAATGGGATA TAAAATTCGT GAAGCTCAAA TGAAAAAAAT ACCTTATCAG 
ATTGTTGTAG GTGACCAAGA AGTAGAGAAT CAAGAAGTAA ATGTAAGAAA ATATGGTTCT 
GAAAAACAAG AATCAGTTGA AAAAGATGAA TTTATTTGGA ATGTTATTGA TGAAATCCGT 
TTGAAAAAGC ATAGATAA 

 

Protein sequence

MNQINIQFPD GNTKEFDKGT TTEDIAQSIS PGLRKKAVAG KFNGQLVDLT RPLEQDGAIE 
IITPGSEEAL EVLRHSTAHL MAQALKRLYG DVKFGVGPVI EGGFYYDFDM DDKVSSDDFD 
KIEKTMKQIV NENHKIVREV VSKEKAKDFF KDDPYKLELI DAIPEDESVT LYTQGEFTDL 
CRGVHVPSTS KIKEFKLLST AGAYWRGNSD NKMLQRIYGT AFFDKKDLKA HLKMLEERRE 
RDHRKIGKDL ELFTNNQLVG AGLPLWLPNG ATIRREIERY IVDKEVSMGY DHVYTPVLAN 
VDLYKTSGHW DHYQEDMFPA MKLDEDEAMV LRPMNCPHHM MIYKNKPHSY RELPIRIAEL 
GTMHRYEASG AVSGLQRVRG MTLNDSHIFV RPDQIKEEFK RVVNMIQDVY KDFGFEDYRF 
RLSYRDPEDK HKYFDDDEMW EKAESMLKEA SDELGLTYEE AIGEAAFYGP KLDVQVKTAM 
GKEETLSTAQ LDFLLPERFD LTYIGQDGEQ HRPVVIHRGV VSTMERFVAF LTEETKGAFP 
TWLAPMQVEI IPVNIDLHYD YARLLQDELK SQGVRVEIDD RNEKMGYKIR EAQMKKIPYQ 
IVVGDQEVEN QEVNVRKYGS EKQESVEKDE FIWNVIDEIR LKKHR