Gene SERP1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1233 
SymbolhemD 
ID3241031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1268567 
End bp1269247 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content31% 
IMG OID637167884 
Producturoporphyrinogen-III synthase 
Protein accessionYP_188807 
Protein GI57867138 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0133688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAG TTATAGTTAT GACGCAGACG AATGAAGTTC ATAGTCATTT AGTTGATATT 
ATCCATAAGC CTTTTATCCA ACTAAAACAA CTTCATTTTA ATGAAAAATT GCTTGATCAT 
AGCTACGACT GGCTTATTTT TTCGTCTAAA AACGCAGTAA AATACTTTTA TCCTTATTTA 
AAAAACGTTA AAGTTAAAAA GGTAGCTGTT ATAGGTGATA AGACAGCTCA GTATTGTAAT 
GAATTAGGTA TTAGTGTCGA CTTTGTGCCA CGTGATTTTT CTCAAGAAGG CTTTTTGGAC 
GAGTTTAAGA TTAGCGAACA ACATTTATTG TTGCCCTCAA GTGAAAAAGC ACGTCCTAAA 
TTAGTTCAAC AATTGAGCAA ATATAATGAA GTCGTTAAAA TTGATTTATA TAGACCAGTA 
CCGAATTTTA AAAATATAAG TCAAGTTAAG TCTCTTGTTA GAAAACATCA AATAGACGCA 
GTGACTTTTT CTAGTTCCTC TGCAGTTGAA TTTTATTTCA AAGAGGACAA TGTGCCTGAA 
TTTGATCATT ATTTTGCTAT CGGTAAGCAA ACTGCTAGGA CCATTTTAAA ATTCAATACA 
TCTGTAAAAG TGGCAAATAA ACAAACATTA GATTCACTTA TTGATAAAAT AATAGAAAGT 
AGGGAACAAA ATGAAATTTG A
 
Protein sequence
MKPVIVMTQT NEVHSHLVDI IHKPFIQLKQ LHFNEKLLDH SYDWLIFSSK NAVKYFYPYL 
KNVKVKKVAV IGDKTAQYCN ELGISVDFVP RDFSQEGFLD EFKISEQHLL LPSSEKARPK 
LVQQLSKYNE VVKIDLYRPV PNFKNISQVK SLVRKHQIDA VTFSSSSAVE FYFKEDNVPE 
FDHYFAIGKQ TARTILKFNT SVKVANKQTL DSLIDKIIES REQNEI