| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1228 |
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| Symbol | valS |
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| ID | 3241835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1261239 |
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| End bp | 1263869 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637167879 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_188802 |
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| Protein GI | 57867133 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0887446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGA AACCAAAATA TGATCCAAGA GAAGTTGAAA AGGGTCGTTA TGAGGAATGG
GTAAGTAATG GTTACTTTAA ACCATCTGAA GATAAATCTA AAGAGGCATA TACAATTGTA
ATTCCGCCCC CTAATGTAAC AGGTAAATTA CATTTAGGTC ATGCATGGGA TACTACTTTA
CAAGATATAA TAACTAGAAT GAAAAGAATG CAAGGATACG ATACTTTATA TCTGCCTGGT
ATGGATCATG CTGGTATAGC AACTCAAGCA AAGGTTGAAG CAAAACTTAA TGAACAAGGT
ATATCTAGAC ACGACTTAGG AAGAGAAAAA TTTTTACAGC AAGCATGGGA TTGGAAAGAA
GAGTATGCAA CATTTATTAG ACAACAATGG GCTAAACTTG GCTTAGGGTT AGATTATAGT
AGAGAACGCT TTACGTTAGA TGATGGTTTA AGTAAAGCTG TAAGAAAAGT ATTTGTTGAT
TTATATAATA AAGGTATTAT TTATCGTGGT GAAAGAATTA TTAACTGGGA CCCTAAAGCT
AGAACAGCTT TATCAGATAT TGAAGTCATT CATGAAGATG TCCAAGGTGC TTTTTATCAT
TTTAAATATC CTTATGCTGA TGGGAATGGA TATATAGAAA TAGCTACTAC ACGTCCTGAG
ACTATGTTAG GTGACACTGC TATTGTTGTA AATCCAAATG ACGAAAGGTA TAAAGATGTG
ATTGGTAAAA CAGTTATATT ACCTATTGTA GGAAGAGAGT TACCTATTTT AGCTGATGAA
TACGTTGATA TTGAATTTGG TTCAGGAGCA ATGAAAGTTA CTCCGGCACA TGATCCTAAT
GACTTTGAAA TTGGTCAAAG ACATCAATTA GAAAATATTA TAGTCATGGA TGAATATGGT
AAGATGAACG ATAAAGCTGA TAAATACAAA GGGATGGATA GATTTGATTG TAGAAATCAG
CTTGTTAAAG ACTTAAAAGA ACAAGATCTT GTTATAAAAA TTGAAGAACA TACACATTCA
GTAGGACATT CTGAACGTTC TGGTGCAATA GTAGAACCTT ATTTGTCTAC ACAATGGTTT
GTAAAAATGA AACCTTTGGC ACAAAGAGCT TTGGATAATC AAAATACAAA AGATAGAATT
GACTTTTTCC CAGGTAGATT TGAAAATACA TTCAATCGCT GGATGGAAGA AATTAGAGAT
TGGACGATTT CGCGTCAACT ATGGTGGGGC CACCAAATAC CTGCTTGGTA TCATAAAGAT
ACAGGTGAAG TCTTTGTTGG TGAAGAAGCA CCTGAAGACA TCGAGAATTG GATACAAGAT
GAGGATGTAT TAGATACATG GTTCTCAAGT GCACTTTGGC CGTTTTCAAC ATTAGGATGG
CCTGATACAA ATGCTGATGA TTTTAAACGT TATTATCCGA CAAATGCATT AGTTACTGGT
TATGATATCA TTTTCTTCTG GGTAGCCCGT ATGATTTTCC AAGGATTAGA ATTTACTGAT
AGAAGACCAT TTAATGATGT ATTACTCCAC GGTTTAGTCA GAGCTGAAGA TGGGCGTAAA
ATGAGTAAAT CATTAGGTAA TGGCGTTGAT CCTATGGATG TTATTGACGA GTATGGCGCT
GATAGTCTAC GTTACTTTTT AGCAACAGGA TCTTCACCAG GTCATGACTT GAGATATTCT
ACTGAAAAAG TTGAATCAGT TTGGAATTTT ATTAATAAAA TATGGAATGC TGCCCGCTTT
AGTTTAATGA ATATTGGTGA AGATTTTAAA GTCGAAGATA TAGACCTAAG TGGTAATTTG
TCATTAGCAG ATCAATGGAT ATTGACTAGA TTAAATGAAA CGATATCTAC AGTAACCGAA
TTAAGTGATA AATACGAATT TGGTGAAGTA GGTCGTGCGC TTTATAATTT CATTTGGGAT
GAGTTCTGCG ATTGGTATAT TGAAATGAGC AAGATACCTA TGAATGGCGA GGACGAATCT
CAAAAGCAAA CGACGCGATC AGTACTTAGT TATGTTTTAG ATAAAATAAT GAAAATGTTA
CATCCATTTA TGCCTTTTGT GACAGAAACA ATTTGGCAAA GTCTTCCACA TCATGGAGAA
ACAATTGTAA AAGCTAACTG GCCAACTGTT GATCAAGCAT TAATCTTTAA TGAAAGTAAA
CAAACAATGG AACAATTAGT TGAAATTATT AAATCTGTCC GTCAATCAAG AGTTGAAGTT
AACACACCGT TATCTAAGGC AATACCGATT TTAATTCAAA CTAAAGATGA AAAGATTAAA
CATACACTTA TGGATAACAT AAGTTACCTA CACAAATTCT GTAATCCAAG TCAATTGACT
ATTGATACTG AGATTGAAAT TCCAGAAAAA GCTATGACAA CTGTAGTAGT TGCTGGTAAG
GTAGTTTTGC CATTAGAAGG TCTTATTGAT ATGGACAAAG AAATTGCTCG ACTTGAAAAA
GAATTAGATA AATTACAAAG CGAGTTAGAT AGAGTAGATA AAAAGTTATC CAACGAGAAT
TTTGTAAATA AAGCACCAGA AAAAATAATT AATGAAGAAA AAGAAAAACA ACAACATTAT
CAAGAAAAAT ATAATGGTGT TAAATCTAGA ATTGAACAAT TAAAGGCATA G
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| Protein sequence | MEMKPKYDPR EVEKGRYEEW VSNGYFKPSE DKSKEAYTIV IPPPNVTGKL HLGHAWDTTL
QDIITRMKRM QGYDTLYLPG MDHAGIATQA KVEAKLNEQG ISRHDLGREK FLQQAWDWKE
EYATFIRQQW AKLGLGLDYS RERFTLDDGL SKAVRKVFVD LYNKGIIYRG ERIINWDPKA
RTALSDIEVI HEDVQGAFYH FKYPYADGNG YIEIATTRPE TMLGDTAIVV NPNDERYKDV
IGKTVILPIV GRELPILADE YVDIEFGSGA MKVTPAHDPN DFEIGQRHQL ENIIVMDEYG
KMNDKADKYK GMDRFDCRNQ LVKDLKEQDL VIKIEEHTHS VGHSERSGAI VEPYLSTQWF
VKMKPLAQRA LDNQNTKDRI DFFPGRFENT FNRWMEEIRD WTISRQLWWG HQIPAWYHKD
TGEVFVGEEA PEDIENWIQD EDVLDTWFSS ALWPFSTLGW PDTNADDFKR YYPTNALVTG
YDIIFFWVAR MIFQGLEFTD RRPFNDVLLH GLVRAEDGRK MSKSLGNGVD PMDVIDEYGA
DSLRYFLATG SSPGHDLRYS TEKVESVWNF INKIWNAARF SLMNIGEDFK VEDIDLSGNL
SLADQWILTR LNETISTVTE LSDKYEFGEV GRALYNFIWD EFCDWYIEMS KIPMNGEDES
QKQTTRSVLS YVLDKIMKML HPFMPFVTET IWQSLPHHGE TIVKANWPTV DQALIFNESK
QTMEQLVEII KSVRQSRVEV NTPLSKAIPI LIQTKDEKIK HTLMDNISYL HKFCNPSQLT
IDTEIEIPEK AMTTVVVAGK VVLPLEGLID MDKEIARLEK ELDKLQSELD RVDKKLSNEN
FVNKAPEKII NEEKEKQQHY QEKYNGVKSR IEQLKA
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