Gene SERP1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1224 
SymboltnpA-1 
ID3241823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1257314 
End bp1258399 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content32% 
IMG OID637167875 
ProductTn554, transposase A 
Protein accessionYP_188798 
Protein GI57867121 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0995985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGTTC AAAGGATAGA AGTGGAGAAT AAGCCGTATC CATTGTATTT ATTACTAGAT 
AAAGAATACC AGCTAATAGA ACCAGTAATG AAATTTATTA AATACTTAGA TAATACTGGT 
AAGTCTCCTA ATACCATTAA GGCATACTGC TATCATTTAA AGTTGCTGTA CGAGTTCATG 
GAACAGAGAG GTGTTATTCT TAATGATATT AACTTTGAGT TGTTAGCAGA CTTCGTAGGT 
TGGTTGAGAT ATCCTTCAGC ATCAAATGTA ATTGATCTTC AGTCAAAAAA AGCCATAAGA 
GAAGAAACGA CAGTGAATAC AATTTTAAAT GTAGTTATGA GTTTTCTTGA TTATTTAAGT 
AGATTAGGAG AATTTAAATC AATTGATGTA TTTAAACAAG CAAAGGGAAG AAATTTCAAA 
GGATTTTTAC ATCATGTTAA TAAGGGTAGA TACCAAAAGA ATGTCTTAAA GTTAAGGGTT 
AAAAAGAAAC AGATAAGAAC ATTGAGATCA AAGGAAGTTA AGCAAATTAT TGATGCTTGT 
CATACGAAAA GAGATAAATT AATTTTAATG CTTATGTATG AGGGTGGTTT AAGAATCGGT 
GAAGTGTTAT CGCTTAGGCT TGAAGATATT GTCACTTGGG ACAATCAAAT CCATTTAACA 
CCTAGAGATG TTAATGTTAA TGAAGCTTAT ATTAAATTAA GGAAGGAAAG AACAATACAT 
GTGAGTAAAG AACTTATGTC ACTTTATACA GATTACTTGA TATATGAGTA TAGTGAGGAA 
TTGGAGCATG ATTATGTTTT TATTTCCTTA AAAGAAGGCT ATTTTGGGAA ACCACTAAAG 
TACCAAAGTG TTCTTGATCT AGTTAGAAGA ATAGTTAAAA GGACTGGAAT AGAATTTACA 
TCACATATGC TTCGCCACAC TCACGCAACG CAGCTAATTA GGGAAGGATG GGATGTTGCG 
TTCGTTCAAA AGAGATTAGG TCACGCACAT GTTCAGACAA CGTTAAATAC CTATGTTCAT 
CTTTCAGATC AGGATATGAA AAATGAGTTT AATAAATACC TCGAGAGAAA GGAGCATAAG 
AAATGA
 
Protein sequence
MKVQRIEVEN KPYPLYLLLD KEYQLIEPVM KFIKYLDNTG KSPNTIKAYC YHLKLLYEFM 
EQRGVILNDI NFELLADFVG WLRYPSASNV IDLQSKKAIR EETTVNTILN VVMSFLDYLS 
RLGEFKSIDV FKQAKGRNFK GFLHHVNKGR YQKNVLKLRV KKKQIRTLRS KEVKQIIDAC 
HTKRDKLILM LMYEGGLRIG EVLSLRLEDI VTWDNQIHLT PRDVNVNEAY IKLRKERTIH 
VSKELMSLYT DYLIYEYSEE LEHDYVFISL KEGYFGKPLK YQSVLDLVRR IVKRTGIEFT 
SHMLRHTHAT QLIREGWDVA FVQKRLGHAH VQTTLNTYVH LSDQDMKNEF NKYLERKEHK 
K