| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1201 |
|---|
| Symbol | |
|---|
| ID | 3241034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1239114 |
|---|
| End bp | 1241405 |
|---|
| Gene Length | 2292 bp |
|---|
| Protein Length | 763 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637167853 |
|---|
| Product | bifunctional preprotein translocase subunit SecD/SecF |
|---|
| Protein accession | YP_188776 |
|---|
| Protein GI | 57867140 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF
[COG0342] Preprotein translocase subunit SecD |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF
[TIGR01129] protein-export membrane protein SecD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.732454 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAAA CGAGTAGAAT AATTGCATTC ATACTCCTCA TAGCTCTACT ATTCACAGGA
ATGGGTATGA CGTATAAGAA TGTAGTTAAA AATGTTAATT TAGGTCTAGA TTTGCAAGGT
GGTTTTGAAG TCCTCTTCCA AGTAGATCCT TTAAATAAAG GAGATAAAAT TGATAAAAAA
GCACTTCAAG CTACATCTCA AACATTAGAA AATCGTGTAA ATGTTCTAGG TGTATCAGAA
CCGAAAATAC AAATCGAAGA TCCAAATCGA ATTCGTGTAC AATTAGCAGG TATCAAGGAT
CAAGCACAAG CGCGTAAATT ATTATCGACA CAAGCTAATT TAACAATTAG AGATGCTGAA
GATCATGTTT TAATGTCTGG TTCAGACATT AAACAAGGCT CTGCTAAACA AGAATTTAAA
CAAGAAACTA ATCAACCAAC AGTTACATTT AAAGTAAAAA GTAAAGATAA ATTTAAGAAA
GTAACTGAAA AGATTTCTAA AAAACGTGAC AATGTCATGG TAGTTTGGTT AGATTTCGAA
AAAGGCGATA GTTACAAGAA AGAAGCTAAA AAGCAACAAG AAGGTAAAAA GCCTAAATTT
ATATCTGCAG CGAGTGTAGA CCAACCTATT AATTCTAGTA GTGTTGAAAT TTCAGGTGGC
TTCAATGGGA AAAAAGGTGT TGAAGAAGCG AAACAAATAG CTGAGTTATT AAATGCCGGC
TCATTACCAG TTGATTTAAA AGAAATTTAC TCTAACTCTG TTGGTGCACA ATTTGGTCAA
GATGCTCTTG ATAAGACCAT GTTTGCATCA ATTGTAGGTA TAGCATTAAT TTATTTATTT
ATGCTTGGTT TCTATCGTTT GCCTGGTTTA GTTGCAATCA TTGCCTTAAC CACTTATATT
TATTTAACTT TAGTCGCATT CAATTTCATA TCAGGTGTAT TAACTCTACC TGGATTGGCG
GCATTAGTTT TAGGTGTAGG TATGGCTGTC GATGCCAATA TCATAATGTA TGAACGTATT
AAAGATGAAC TAAGAATTGG ACGCACGCTT AAACAAGCGT ATTCAAAAGC AAATAAAAGT
TCATTCTTAA CTATATTTGA TTCCAACTTA ACAACTGTCA TCGCTGCAGC TGTGCTTTTC
TTCTTTGGAG AAAGTTCAGT CAAAGGCTTC GCAACCATGT TACTCTTAGG TATTTTAATG
ATATTTGTAA CCGCAGTATT CTTATCAAGA GGGTTGTTAT CATTACTGGT ATCTTCAAAC
TTCTTTAAAA AACAATACTG GTTATTTGGT GTTAAGAAGA AGGATAGACA TGATATTAAT
GAAGGTAAAG ATGTACATGA TTTAAAAACA TCATATGAAA GGTTAAACTT TGTTAAATTA
GCTAAGCCAC TTATTTCACT TAGTATTTTA ATTGTAATTA TTGGTTTGAT TATCATTTCA
ATATTTAAAT TAAACTTAGG TATTGATTTC TCATCCGGAA CAAGAGCAGA TATTCAATCT
AAAAATGCTA TAACACAAGC ACAGGTTGAG AAAACTGTAA AATCAGTTGG ATTGGAACCA
GATCAAATAC AGATTAATGG TAGTGGAAAT AAAAATGCCA CAGTTCAGTT TAAAAAAGAT
TTATCACGTG AGGAAGACAA TAAATTAAGT GCTAAGGTGA AATCTGAATT TGGAGATAAT
CCACAAATTA ATACCGTTTC ACCTCTCATA GGCCAAGAGC TAGCTAAAAA TGCTGTAACT
GCATTAATAC TTGCTTCTAT AGGCATTATT ATCTATGTTT CACTAAGATT TGAATGGCGT
ATGGGTCTAT CTTCTGTACT TGCATTATTA CATGACGTAT TTATCATCAT TGCAATCTTT
AGTTTGTTTA GATTAGAAGT AGATTTAACA TTTATTGCAG CAGTATTAAC TATCGTTGGT
TATTCAATCA ATGATACAAT CGTAACTTTC GACCGTGTTC GAGAAAATCT GCATAAAGTT
AAAGTAATTA CGCATACTGA TCAAATTGAT GATATAGTCA ACCGCTCTAT TAGACAAACT
ATGACACGTT CTATTAATAC AGTGTTGACT GTAGTTGTAG TTGTAGTTGC AATATTAATA
TTAGGTGCAC CAACAATATT TAATTTCTCT TTAGCATTAC TAATTGGATT ATTATCTGGT
GTATTCTCGT CAATTTTCAT TGCTGTACCA TTATGGGGCA TGCTTAAGAA ACGACAGTTT
AAAAAGACAA AAAATAATAA ATTAGTAGTA CACAAAGAGA AGAAATCTAA CGATGAAAAA
ATCTTAGTTT AA
|
|---|
| Protein sequence | MKKTSRIIAF ILLIALLFTG MGMTYKNVVK NVNLGLDLQG GFEVLFQVDP LNKGDKIDKK
ALQATSQTLE NRVNVLGVSE PKIQIEDPNR IRVQLAGIKD QAQARKLLST QANLTIRDAE
DHVLMSGSDI KQGSAKQEFK QETNQPTVTF KVKSKDKFKK VTEKISKKRD NVMVVWLDFE
KGDSYKKEAK KQQEGKKPKF ISAASVDQPI NSSSVEISGG FNGKKGVEEA KQIAELLNAG
SLPVDLKEIY SNSVGAQFGQ DALDKTMFAS IVGIALIYLF MLGFYRLPGL VAIIALTTYI
YLTLVAFNFI SGVLTLPGLA ALVLGVGMAV DANIIMYERI KDELRIGRTL KQAYSKANKS
SFLTIFDSNL TTVIAAAVLF FFGESSVKGF ATMLLLGILM IFVTAVFLSR GLLSLLVSSN
FFKKQYWLFG VKKKDRHDIN EGKDVHDLKT SYERLNFVKL AKPLISLSIL IVIIGLIIIS
IFKLNLGIDF SSGTRADIQS KNAITQAQVE KTVKSVGLEP DQIQINGSGN KNATVQFKKD
LSREEDNKLS AKVKSEFGDN PQINTVSPLI GQELAKNAVT ALILASIGII IYVSLRFEWR
MGLSSVLALL HDVFIIIAIF SLFRLEVDLT FIAAVLTIVG YSINDTIVTF DRVRENLHKV
KVITHTDQID DIVNRSIRQT MTRSINTVLT VVVVVVAILI LGAPTIFNFS LALLIGLLSG
VFSSIFIAVP LWGMLKKRQF KKTKNNKLVV HKEKKSNDEK ILV
|
|---|
| |