Gene SERP1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1193 
SymbolhisS 
ID3241828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1229867 
End bp1231141 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content32% 
IMG OID637167846 
Producthistidyl-tRNA synthetase 
Protein accessionYP_188769 
Protein GI57867126 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00442] histidyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000346938 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGA TGCCAAGAGG TACCCAAGAT ATCTTGCCGC AAGATTCTGC TAAATGGCGT 
TACATTGAAA ATCGATTACA CACATTAATG GAATTGTATA ATTATAAAGA AATAAGAACG
CCAATTTTTG AAAGTACTGA ACTTTTTGCA AGAGGCGTGG GGGATTCTAC TGACGTTGTT
CAAAAGGAAA TGTATACATT TAAAGATAAA GGGGATCGTA GTTTAACATT ACGTCCTGAA
GGAACTGCAG CCGTTGTACG TTCATATATT GAACACAAAA TGCAAGGTGA ACCCAATCAA
CCTATCAAAC TTTACTACAA TGGTCCTATG TTTAGATACG AACGTAAACA AAAAGGAAGA
TATCGCCAAT TTAACCAATT TGGTGTCGAA GCAATAGGAG CGGAAAATCC TAGTATTGAT
GCTGAAATAC TCGCTATGGT TATGCATATA TATGAGTCTT TCGGATTAAA GCATTTAAAG
TTAGTTATCA ATAGTATTGG TGATAGTGAA TCACGTAAAG AATATAACGA AGCATTAGTA
AAACATTTTG AACCTGTGAT TGATACATTT TGTTCAGATT GTCAATCAAG ATTACACACT
AATCCTATGA GAATTTTAGA TTGTAAAATC GATAGAGATA AAGAAGCAGT AAAAAATGCA
CCCCGTATCA CAGATTATCT CAATAATGAT TCTAAATCTT ATTATGAACA AGTTAAATTA
CATCTTGATA ATTTGAACAT ATCTTATGTT GAAGATCCTA ACTTAGTTCG TGGGTTAGAT
TATTATACTC ATACTGCCTT TGAATTAATG ATTGATAATC CAGAGTATGA TGGAGCTATC
ACTACATTAT GTGGTGGTGG TCGATATAAT GGGTTGTTAC AATTATTAGA TGGTCCAGAT
GAAACAGGTA TTGGGTTTGC ACTAAGTATT GAAAGATTAT TGATGGCACT TGATGAAGAA
GGTATTTCAT TAGATGTAAG TGAAGATTTT GATTTATTTG TTGTGACAAT GGGAGAAGAT
GCCGATCGTT ATGCTGTTAA GTTAATCAAT GATTTAAGAA GAAATGGAAT AAAAGTAGAT
AAGGATTATC TAAACAGAAA AATTAAAGGA CAAATGAAAC AAGCTGACCG TCTTAATGCT
AAATATACAG TAGTAATTGG AGATCAAGAG CTTGAAAATA ATGAAATTGG TGTGAAAAAC
ATGATTTCAG GCGAATCAGA AAATGTACAA TTAGACGAAT TGGTTAATTA TTTTAAAAGT
AGAAAGGAAG TCTAA
 
Protein sequence
MIKMPRGTQD ILPQDSAKWR YIENRLHTLM ELYNYKEIRT PIFESTELFA RGVGDSTDVV 
QKEMYTFKDK GDRSLTLRPE GTAAVVRSYI EHKMQGEPNQ PIKLYYNGPM FRYERKQKGR
YRQFNQFGVE AIGAENPSID AEILAMVMHI YESFGLKHLK LVINSIGDSE SRKEYNEALV
KHFEPVIDTF CSDCQSRLHT NPMRILDCKI DRDKEAVKNA PRITDYLNND SKSYYEQVKL
HLDNLNISYV EDPNLVRGLD YYTHTAFELM IDNPEYDGAI TTLCGGGRYN GLLQLLDGPD
ETGIGFALSI ERLLMALDEE GISLDVSEDF DLFVVTMGED ADRYAVKLIN DLRRNGIKVD
KDYLNRKIKG QMKQADRLNA KYTVVIGDQE LENNEIGVKN MISGESENVQ LDELVNYFKS
RKEV