Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1185 |
Symbol | mnmA |
ID | 3241814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1220766 |
End bp | 1221884 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167838 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_188761 |
Protein GI | 57867112 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCTAACA AAGATATACG CGTAGTTGTG GGCATGTCTG GTGGAGTGGA TAGCTCTGTT ACTGCATACT TGTTAAAAGA ACAAGGTTAT GATGTAATAG GTATATTTAT GAAAAATTGG GACGATACTG ATGAAAATGG GGTGTGTACA GCCACTGAGG ATTATAATGA CGTGATTGCA GTATGTAATC AAATTGGCAT CCCATACTAC GCTGTTAATT TTGAAGAACA GTATTGGGAT AAAGTATTTA CTTATTTTCT TGATGAATAT AAAAAAGGTC GTACACCTAA CCCTGATGTG ATGTGTAATA AAGAAATTAA ATTTAAAGCA TTTTTAGAAC ATGCTTTAAA ATTAGGCGCT GATTATGTCG CTACAGGTCA TTATGCTCGT ATACGTCGTC ATGATGATGG GCATGTTGAA ATGCTAAGAG GTGTTGACAA TAATAAAGAC CAAACCTACT TTTTAAATCA ATTATCCCAA GAACAACTAT CCAAAGTCAT GTTCCCAATT GGAGATATTG AAAAAAGTGA AGTAAGACGT ATTGCAGAAG AGCAAAATTT AGCTACTGCC AAGAAAAAAG ACTCAACAGG TATTTGTTTT ATTGGTGAAA GAAACTTTAA AGAATTTTTA TCACATTACC TACCAGCTCA ATCTGGTGAA ATGTTGACAT TAAATGGAAA AAAAATGGGA CAGCATAGTG GATTGATGTA TTATACAATT GGTCAACGTC ACGGCTTAGG CATCGGTGGA GATGGAGATC CATGGTTTGT TGTAGGTAAA AATTTAAATG ATAACGTATT ATATGTTGAA CAGGGATTTC ACCATGATGC ACTTTATAGT GATTATCTCA TAGCTTCTGA TTATTCATTT GTTAATCCAA GTGAAATTGA TTTGGAAAAA GGTTTTGAAT GTACAGCTAA ATTCCGTTAT CGCCAAAAAG ATACTAAAGT TTATGTTCAA CGCGAAAACG AGAATTCTAT TAGAGTAACT TTTGCTGAAC CAGTTAGAGC GATTACACCT GGTCAAGCAG TTGTCTTCTA TAATCAAGAA GTATGTTTAG GTGGCGCTAC AATTGATGAT GTTTATAAAA ACGAAGGTCA ATTAAGTTAC GTTGTATAA
|
Protein sequence | MSNKDIRVVV GMSGGVDSSV TAYLLKEQGY DVIGIFMKNW DDTDENGVCT ATEDYNDVIA VCNQIGIPYY AVNFEEQYWD KVFTYFLDEY KKGRTPNPDV MCNKEIKFKA FLEHALKLGA DYVATGHYAR IRRHDDGHVE MLRGVDNNKD QTYFLNQLSQ EQLSKVMFPI GDIEKSEVRR IAEEQNLATA KKKDSTGICF IGERNFKEFL SHYLPAQSGE MLTLNGKKMG QHSGLMYYTI GQRHGLGIGG DGDPWFVVGK NLNDNVLYVE QGFHHDALYS DYLIASDYSF VNPSEIDLEK GFECTAKFRY RQKDTKVYVQ RENENSIRVT FAEPVRAITP GQAVVFYNQE VCLGGATIDD VYKNEGQLSY VV
|
| |