Gene SERP1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1184 
Symbol 
ID3241813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1219935 
End bp1220603 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content30% 
IMG OID637167837 
ProductTPR domain-containing protein 
Protein accessionYP_188760 
Protein GI57867111 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.441654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAAC AAAGTAAGAT ATACCAAAAT ATTAAAGATG GTAAATTAGA TACCGCTTTG 
AAAGACTTGT TTGAAAATAT AGAAGAAAAT CCGGCCATTG TTGAAAATTA TATTAACGCA 
GGTATTGTAT TATCAGATGT TGGAGAAATT GAAAAAGCAG AACGTTTTTT CCAAAAGGCA 
TTAACTATTG AACCTGAAAA TGGTGCTGTT TATTATAACT TGGCAAATAT TTATTATAAT 
GAAGAACGTT ATAACGAAGC GATAAAGCTA TATCAAACTG CACTACAATA TGAAGTAGCG 
AAAAAAGATT GTAATTATAT GATTGGTATG TCGTTTAATC AACTAGGTGC TTTTAAAGAA 
GCTTTACCAT TTTTAATGAC TGCAGCTGAA ATGGACGATG ATAGAGATTT AGAAGTACAG 
TTTCAATATG GGTTAGTACT ATGCCAACTC GAAATGTTTG ATGAAGCTAT TAAACAATTA 
AATAAGGTTC TTTCTATCGA TTCACAGCAC GTAGATGGTA TATATAATCT TGGTTTAGCA 
ACATATATGA AAAATGAAAA TTTAGATGAA GCAATTGCAT ATTTTGAACA AGCAATATCA 
ATTGATGAAA AACATTTACT TAGTCAACAT GCATTAAAGA CATTCAAAAC AATGAAAGAG 
GAGGAATAA
 
Protein sequence
MHEQSKIYQN IKDGKLDTAL KDLFENIEEN PAIVENYINA GIVLSDVGEI EKAERFFQKA 
LTIEPENGAV YYNLANIYYN EERYNEAIKL YQTALQYEVA KKDCNYMIGM SFNQLGAFKE 
ALPFLMTAAE MDDDRDLEVQ FQYGLVLCQL EMFDEAIKQL NKVLSIDSQH VDGIYNLGLA 
TYMKNENLDE AIAYFEQAIS IDEKHLLSQH ALKTFKTMKE EE