Gene SERP1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1183 
Symbol 
ID3241854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1217501 
End bp1219933 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content32% 
IMG OID637167836 
ProductRecD/TraA family helicase 
Protein accessionYP_188759 
Protein GI57867110 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACC CTACACTTTT TGATTATTCA ATGATCAAAG GTACAGTTGA TGCTATTTTA 
TTTCAAAATA CGGATAATTT TTATACTGTT CTAAAAGTAG ATACTATAGA ATCAAATGAA
AAATTTGATA GTATGCCAAC TGTGGTAGGG TTTCTTCCCA ATGTAGTTGA AGGCGATGTT
TATACTTTTA AAGGGCAAGT CGTACAACAT CCACGTTATG GTAAGCAATT AAAGGCTGAA
ACATTTGAAA AAGAATTACC TCAAACTAAA GAAGCCATTA TTAGTTACTT ATCAAGTGAT
TTATTTAAAG GCATCGGTAA AAAAACGGCT CAAAACATTG TAAATACACT AGGTGAAAAT
GCTATAAATG ATATTTTAAC TCGTCCAGAA ATCTTAGAAA GTGTACCTAG TTTACCAAAG
AAGAAACAAA AGCAAATTGC TGATCAGATT AATGCAAACC AAGAATCTGA GAAAATTATG
ATACGTTTAC ACGACCTAGG GTTTGGTCCG AAATTATCAA TGGCTATATA TCAGTTCTAT
ATGGGTGATA CTTTAAATGT CTTAGATAAA AATCCTTACC AATTAGTATA TGACATTAAA
GGTATTGGTT TTAATAAGGC TGACCAACTT GCTCGAAATG TCGGTATTGA GCCACATTCA
CCTGAAAGAT TAAAAGCAGC ATTATTATTT ACGTTAGAAG AAGAATGTAT CAAACAAGGA
CATACATATC TACCTCGTAC AATTGTTATA GAAACAACAC AAAATTTACT CAATGAAGAT
ATTGAGAAAC CAATTGAAAC AGAGCAATTA CTAGAAATCA TTGACGTTTT ATCAGAAGAG
AAAAAATTAA TATCTGAAGC TGATCAGGTA TCAATTCCAA GTTTATACTA TTCAGAATTG
AAAAGTGTGC AAAACTTATA CCGAATTAAA ACAAACACAT CTAAATTAAA AGAAATAGAA
CAGTCTGATT TACAAATACA TATTGGTGAT ATTGAGTCAC AAAATGAGGT TAATTACTCT
GCCTCTCAAA AAGAAGCGCT TGAAACAGCA ATAAATTCTA AAATTATGCT TTTAACTGGT
GGTCCGGGTA CCGGTAAAAC CACAGTCATT AAAGGTATAG TTGAATTATA TGCAGAAATA
CATGGGCTCT CGCTCGATTA TGATGATTAC AATGAAGATG ATTATCCAGT AGTGTTAGCT
GCACCCACTG GTCGTGCTTC TAAGCGCCTT CACGAATCGA CAGGTTTAGA AGCAATGACA
ATTCATCGTT TAATCGGTTG GAACCAAGAT ACACAACCAC AGGATATTTT AGAAAATGAG
ATCAATGCAA GACTCATTAT CATCGATGAA ATGTCAATGG TAGATACTTG GTTGTTCCAT
CAATTTTTAA GCGCTGTGCC TTTAGAAGCA CAAATTGTAT TTGTCGGAGA TGAAGATCAG
TTACCATCAG TAGGTCCAGG ACAGGTATTT AAAGACCTTA TTGATTCTGA AATAATACCG
CGTGTTAATC TTACCGAAGT ATATCGTCAG CAAGATGGTT CCAGTATTAT TGACTTAGCT
CACCGTATGA AATTAAATGA ACCTATCGAT ATTACTAAAC GTTATCATGA TCGTAGTTTT
ATTCGTTGTG GTACGAATCA AATTCCAGAC GTTGTTGATA AAGTAGTTAA AAGCGCTGTA
GCTAAAGGCT ATGATATGAG TGATATACAA GTTTTGGCTC CTATGTATAA AGGTAACGCT
GGTATTAAGA GACTTAACCA AGTTCTACAA TCTATTCTTA ATCCGAAGCA ACAAGATGAT
CGTGAAATAG AATTTGGTGA AGCTGTGTTT AGAAAAGGGG ATAAAGTACT TCAGTTAGTT
AATCGACCTA ATGATAATAT ATTTAATGGG GATATAGGTA TAATAGTAGG TATATTTTGG
GCCAAAGAAA ATGCTCTAAA TAAGGATGTG TTAGTTGTAG ATTTTGAAGG TAATGAAATT
ACATTTACTA AACAAGATTT AATGGAACTA ACACATGCAT ATTGTACATC TATCCATAAA
TCACAAGGTT CAGAATTTCC TATTGTAATT ATGCCTATTG TTAGACAATA TTATAGGATG
TTACAACGTC CCATTCTTTA TACAGGATTA ACTAGAGCTA AACAATCACT TGTTTTGCTT
GGTGAACAAG AAGCATTTGA TATAGGTTTA AAAACAAATG GACAAATACG ATTAACGCAA
TTAAATGATT TGTTAAAATC GTATTTTGGA CAAAACAAAA ATAATTTAAC TACAAATAAA
CAAACGATTA ACGAACAAAA AGAAAATAAC AATCATCTGG ATTTGAAAAA TGAAAAAGAA
AATGATATCC AATTAAACGA GTCGACAATT TTCCAAATCG ATCCAATGAT TAATATGGGG
GAAATGACGC CATATGACTT CGTTGAACGT TGA
 
Protein sequence
MSDPTLFDYS MIKGTVDAIL FQNTDNFYTV LKVDTIESNE KFDSMPTVVG FLPNVVEGDV 
YTFKGQVVQH PRYGKQLKAE TFEKELPQTK EAIISYLSSD LFKGIGKKTA QNIVNTLGEN
AINDILTRPE ILESVPSLPK KKQKQIADQI NANQESEKIM IRLHDLGFGP KLSMAIYQFY
MGDTLNVLDK NPYQLVYDIK GIGFNKADQL ARNVGIEPHS PERLKAALLF TLEEECIKQG
HTYLPRTIVI ETTQNLLNED IEKPIETEQL LEIIDVLSEE KKLISEADQV SIPSLYYSEL
KSVQNLYRIK TNTSKLKEIE QSDLQIHIGD IESQNEVNYS ASQKEALETA INSKIMLLTG
GPGTGKTTVI KGIVELYAEI HGLSLDYDDY NEDDYPVVLA APTGRASKRL HESTGLEAMT
IHRLIGWNQD TQPQDILENE INARLIIIDE MSMVDTWLFH QFLSAVPLEA QIVFVGDEDQ
LPSVGPGQVF KDLIDSEIIP RVNLTEVYRQ QDGSSIIDLA HRMKLNEPID ITKRYHDRSF
IRCGTNQIPD VVDKVVKSAV AKGYDMSDIQ VLAPMYKGNA GIKRLNQVLQ SILNPKQQDD
REIEFGEAVF RKGDKVLQLV NRPNDNIFNG DIGIIVGIFW AKENALNKDV LVVDFEGNEI
TFTKQDLMEL THAYCTSIHK SQGSEFPIVI MPIVRQYYRM LQRPILYTGL TRAKQSLVLL
GEQEAFDIGL KTNGQIRLTQ LNDLLKSYFG QNKNNLTTNK QTINEQKENN NHLDLKNEKE
NDIQLNESTI FQIDPMINMG EMTPYDFVER