Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1183 |
Symbol | |
ID | 3241854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1217501 |
End bp | 1219933 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167836 |
Product | RecD/TraA family helicase |
Protein accession | YP_188759 |
Protein GI | 57867110 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGACC CTACACTTTT TGATTATTCA ATGATCAAAG GTACAGTTGA TGCTATTTTA TTTCAAAATA CGGATAATTT TTATACTGTT CTAAAAGTAG ATACTATAGA ATCAAATGAA AAATTTGATA GTATGCCAAC TGTGGTAGGG TTTCTTCCCA ATGTAGTTGA AGGCGATGTT TATACTTTTA AAGGGCAAGT CGTACAACAT CCACGTTATG GTAAGCAATT AAAGGCTGAA ACATTTGAAA AAGAATTACC TCAAACTAAA GAAGCCATTA TTAGTTACTT ATCAAGTGAT TTATTTAAAG GCATCGGTAA AAAAACGGCT CAAAACATTG TAAATACACT AGGTGAAAAT GCTATAAATG ATATTTTAAC TCGTCCAGAA ATCTTAGAAA GTGTACCTAG TTTACCAAAG AAGAAACAAA AGCAAATTGC TGATCAGATT AATGCAAACC AAGAATCTGA GAAAATTATG ATACGTTTAC ACGACCTAGG GTTTGGTCCG AAATTATCAA TGGCTATATA TCAGTTCTAT ATGGGTGATA CTTTAAATGT CTTAGATAAA AATCCTTACC AATTAGTATA TGACATTAAA GGTATTGGTT TTAATAAGGC TGACCAACTT GCTCGAAATG TCGGTATTGA GCCACATTCA CCTGAAAGAT TAAAAGCAGC ATTATTATTT ACGTTAGAAG AAGAATGTAT CAAACAAGGA CATACATATC TACCTCGTAC AATTGTTATA GAAACAACAC AAAATTTACT CAATGAAGAT ATTGAGAAAC CAATTGAAAC AGAGCAATTA CTAGAAATCA TTGACGTTTT ATCAGAAGAG AAAAAATTAA TATCTGAAGC TGATCAGGTA TCAATTCCAA GTTTATACTA TTCAGAATTG AAAAGTGTGC AAAACTTATA CCGAATTAAA ACAAACACAT CTAAATTAAA AGAAATAGAA CAGTCTGATT TACAAATACA TATTGGTGAT ATTGAGTCAC AAAATGAGGT TAATTACTCT GCCTCTCAAA AAGAAGCGCT TGAAACAGCA ATAAATTCTA AAATTATGCT TTTAACTGGT GGTCCGGGTA CCGGTAAAAC CACAGTCATT AAAGGTATAG TTGAATTATA TGCAGAAATA CATGGGCTCT CGCTCGATTA TGATGATTAC AATGAAGATG ATTATCCAGT AGTGTTAGCT GCACCCACTG GTCGTGCTTC TAAGCGCCTT CACGAATCGA CAGGTTTAGA AGCAATGACA ATTCATCGTT TAATCGGTTG GAACCAAGAT ACACAACCAC AGGATATTTT AGAAAATGAG ATCAATGCAA GACTCATTAT CATCGATGAA ATGTCAATGG TAGATACTTG GTTGTTCCAT CAATTTTTAA GCGCTGTGCC TTTAGAAGCA CAAATTGTAT TTGTCGGAGA TGAAGATCAG TTACCATCAG TAGGTCCAGG ACAGGTATTT AAAGACCTTA TTGATTCTGA AATAATACCG CGTGTTAATC TTACCGAAGT ATATCGTCAG CAAGATGGTT CCAGTATTAT TGACTTAGCT CACCGTATGA AATTAAATGA ACCTATCGAT ATTACTAAAC GTTATCATGA TCGTAGTTTT ATTCGTTGTG GTACGAATCA AATTCCAGAC GTTGTTGATA AAGTAGTTAA AAGCGCTGTA GCTAAAGGCT ATGATATGAG TGATATACAA GTTTTGGCTC CTATGTATAA AGGTAACGCT GGTATTAAGA GACTTAACCA AGTTCTACAA TCTATTCTTA ATCCGAAGCA ACAAGATGAT CGTGAAATAG AATTTGGTGA AGCTGTGTTT AGAAAAGGGG ATAAAGTACT TCAGTTAGTT AATCGACCTA ATGATAATAT ATTTAATGGG GATATAGGTA TAATAGTAGG TATATTTTGG GCCAAAGAAA ATGCTCTAAA TAAGGATGTG TTAGTTGTAG ATTTTGAAGG TAATGAAATT ACATTTACTA AACAAGATTT AATGGAACTA ACACATGCAT ATTGTACATC TATCCATAAA TCACAAGGTT CAGAATTTCC TATTGTAATT ATGCCTATTG TTAGACAATA TTATAGGATG TTACAACGTC CCATTCTTTA TACAGGATTA ACTAGAGCTA AACAATCACT TGTTTTGCTT GGTGAACAAG AAGCATTTGA TATAGGTTTA AAAACAAATG GACAAATACG ATTAACGCAA TTAAATGATT TGTTAAAATC GTATTTTGGA CAAAACAAAA ATAATTTAAC TACAAATAAA CAAACGATTA ACGAACAAAA AGAAAATAAC AATCATCTGG ATTTGAAAAA TGAAAAAGAA AATGATATCC AATTAAACGA GTCGACAATT TTCCAAATCG ATCCAATGAT TAATATGGGG GAAATGACGC CATATGACTT CGTTGAACGT TGA
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Protein sequence | MSDPTLFDYS MIKGTVDAIL FQNTDNFYTV LKVDTIESNE KFDSMPTVVG FLPNVVEGDV YTFKGQVVQH PRYGKQLKAE TFEKELPQTK EAIISYLSSD LFKGIGKKTA QNIVNTLGEN AINDILTRPE ILESVPSLPK KKQKQIADQI NANQESEKIM IRLHDLGFGP KLSMAIYQFY MGDTLNVLDK NPYQLVYDIK GIGFNKADQL ARNVGIEPHS PERLKAALLF TLEEECIKQG HTYLPRTIVI ETTQNLLNED IEKPIETEQL LEIIDVLSEE KKLISEADQV SIPSLYYSEL KSVQNLYRIK TNTSKLKEIE QSDLQIHIGD IESQNEVNYS ASQKEALETA INSKIMLLTG GPGTGKTTVI KGIVELYAEI HGLSLDYDDY NEDDYPVVLA APTGRASKRL HESTGLEAMT IHRLIGWNQD TQPQDILENE INARLIIIDE MSMVDTWLFH QFLSAVPLEA QIVFVGDEDQ LPSVGPGQVF KDLIDSEIIP RVNLTEVYRQ QDGSSIIDLA HRMKLNEPID ITKRYHDRSF IRCGTNQIPD VVDKVVKSAV AKGYDMSDIQ VLAPMYKGNA GIKRLNQVLQ SILNPKQQDD REIEFGEAVF RKGDKVLQLV NRPNDNIFNG DIGIIVGIFW AKENALNKDV LVVDFEGNEI TFTKQDLMEL THAYCTSIHK SQGSEFPIVI MPIVRQYYRM LQRPILYTGL TRAKQSLVLL GEQEAFDIGL KTNGQIRLTQ LNDLLKSYFG QNKNNLTTNK QTINEQKENN NHLDLKNEKE NDIQLNESTI FQIDPMINMG EMTPYDFVER
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