Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1172 |
Symbol | |
ID | 3242897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1207028 |
End bp | 1207759 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637167825 |
Product | hypothetical protein |
Protein accession | YP_188748 |
Protein GI | 57867083 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2049] Allophanate hydrolase subunit 1 |
TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGGACAC AATTTATTAA TGAACAAACA ATGATGATTT ACTTTGAAAA TGAAATTAGT GAATCAACTT TCAAAAAGGT ACAACAAACA ATTCAATATA TAAAATCGAA AAATTTATCT GAAATAACAA ACATGATACC TTCATATCGT GCTATTCTAA TTTACTTTGA TAAATCGGGG ATAAACGGAA CTGAATTATT AGAAAATTTA GAACTCGATG AAAATTCGAA CAGTAGAAAA CAATCACATT TTAAACAGCG TATCATTCAT ATACCTGTAT TATATGGTGG AGATTTTGGT CCAGATTTAT CAGAAGTAGC TAACGTTAAT AAATTAAGTC AGGAAGAAGT TATTCAAATA CATACACAAC AACCTTATCT AATCTATATG CTTGGGTTTA TGCCGGGTTT CCCATACTTA GGTGGATTGG ATGCTAAGTT GCACACACCT AGACGGTCTG AACCTAGAAT CAAAATTAAC GCTGGTTCTG TTGGAATAGC AAATAATCAA ACAGGTTTAT ATCCTATGGA CTCACCTGGT GGTTGGCAGA TAATTGGTCG CACACCAATA AAAGTCTTTG ATTTAAATAG GACACCAATG ACGTTATATG AAGCTGGTGA TTACATACAA TTTTATAGTA TAAATTATCA AGAGTTTGAA AAAATATCAA ACGATATTAA TAAAGGAAAA TTTGATATAG ATAAGTGGGT GACATATCAA GATGAGTATT AA
|
Protein sequence | MRTQFINEQT MMIYFENEIS ESTFKKVQQT IQYIKSKNLS EITNMIPSYR AILIYFDKSG INGTELLENL ELDENSNSRK QSHFKQRIIH IPVLYGGDFG PDLSEVANVN KLSQEEVIQI HTQQPYLIYM LGFMPGFPYL GGLDAKLHTP RRSEPRIKIN AGSVGIANNQ TGLYPMDSPG GWQIIGRTPI KVFDLNRTPM TLYEAGDYIQ FYSINYQEFE KISNDINKGK FDIDKWVTYQ DEY
|
| |