| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1165 |
|---|
| Symbol | |
|---|
| ID | 3242882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1200778 |
|---|
| End bp | 1201305 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637167818 |
|---|
| Product | HAD superfamily hydrolase |
|---|
| Protein accession | YP_188741 |
|---|
| Protein GI | 57867068 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2179] Predicted hydrolase of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.504766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAATCA TAAAAAAATT ATTTATGCCA AATGCATATG TGAAATCAAT ATTTGAAATT
GATATAGAAA AACTTGCCGA TAGTGGTGTT AAAGGTATCA TAACTGATTT AGATAATACA
CTTGTTGGTT GGGATGTTAA AGAACCTACT AAGGGTGTTA AATCATGGTT TGCTAAGGCT
AAAGATTTAG GAATAACTGT CACAATTGTG TCAAATAATA ATAAAAGTCG AGTATCAAGT
TTCTCAAGTA ATTTAGGTGT AGATTATATA TTCAAAGCAC GTAAACCGAT GGGGAAAGCC
TTTAAGATGG CTATTAAAAA AATGAAAATT CAACCGAGAG AAACCGTTGT TGTAGGAGAT
CAAATGCTTA CTGATGTGTT TGGTGGCAAT TGTAATGGTT TATATACAAT TATGGTAGTA
CCTGTTAAAC GGACTGATGG ATTAATTACA AAGTTTAATC GATTAATTGA AAGACGATTA
TTAAATCATT TTAGAAAAAA AGGTTATATT AAATGGGAGG AAAATTGA
|
|---|
| Protein sequence | MGIIKKLFMP NAYVKSIFEI DIEKLADSGV KGIITDLDNT LVGWDVKEPT KGVKSWFAKA
KDLGITVTIV SNNNKSRVSS FSSNLGVDYI FKARKPMGKA FKMAIKKMKI QPRETVVVGD
QMLTDVFGGN CNGLYTIMVV PVKRTDGLIT KFNRLIERRL LNHFRKKGYI KWEEN
|
|---|
| |