Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1145 |
Symbol | |
ID | 3242110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1181514 |
End bp | 1182275 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637167798 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_188721 |
Protein GI | 57867034 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGATAATT TGCAAAGATA TTTTATGAAT CAAAGCGCTG ATGAAAATCA GTGCTTTTTT ATTGAAAACA AAGAAGACTA TCATCATATC GTGAATGTTA TGCGCTATAA AGAAGGACAA AATATTATTG TCACTTTTTC AGATGAAAAT GTATTCAAAT GTAAAATTAT TTCAATAAAC GATCAATCGA TTGAAATTAA ATTAGTAGAA AAGCAACAAA TTAACACTGA ACTACCTCAG AACATTACAA TATGTAGTGG TTTAATCAAA GCAGACAAAT ATGAATGGAT GATACAAAAA GCAACTGAAA TGGGGGCAAA TGAGTTTATA GCTGTAGCCA TGGAACGTTC TGTGGTCAAG CTCAATGATT CTAAAGTAGA AAAGAAATTA TCGAGATGGC AAAAAATTAT AAAGGAAGCT GCAGAACAAA GTTATCGTTT AACAATACCA AATATAAAAT TTAAGTCGAA TTTAAAAGAA ATTTATGGTA TGATAAGTCA ATATGACTAT GTTCTTATAG CATATGAAGA ACAAGCAAAG CACGGTGAAT TAAGTCAATT TAAGCAAACA ATTAAACAAT TTAAGACACA GGATCGTGTT TTAATCATAT TTGGACCTGA AGGTGGGCTA TCAGATAGTG AAATTTCATT ATTCGGTGAT GTAAGTACTA TAGTTGGATT AGGTCCACGT ATCTTGCGTG CTGAAACTGC ACCTCTTTAC GCTTTAAGTG CAGTAAGTTA TGAAAAAGAA TTATTGGGGT GA
|
Protein sequence | MDNLQRYFMN QSADENQCFF IENKEDYHHI VNVMRYKEGQ NIIVTFSDEN VFKCKIISIN DQSIEIKLVE KQQINTELPQ NITICSGLIK ADKYEWMIQK ATEMGANEFI AVAMERSVVK LNDSKVEKKL SRWQKIIKEA AEQSYRLTIP NIKFKSNLKE IYGMISQYDY VLIAYEEQAK HGELSQFKQT IKQFKTQDRV LIIFGPEGGL SDSEISLFGD VSTIVGLGPR ILRAETAPLY ALSAVSYEKE LLG
|
| |