Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1121 |
Symbol | |
ID | 3242902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1159698 |
End bp | 1160546 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637167774 |
Product | ABC transporter, permease protein |
Protein accession | YP_188697 |
Protein GI | 57867088 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.44937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAGATG CGTTATTAAA TTTTGATTTT ATTAGATATT CTTTGATTAG CGGTCTGCTT ATTGGCTTTA TCGCACCATT AATAGGTGCA TTTATTGTAG TTCGGAGACT ATCTTTAATT GCTGACGCTT TAAGCCACGT GACATTAGGT GGTATTTCCT TTGGTATGTT TTTGCTTACC ATTATTCCCG TTTTCTCAGT AATAAACCCT ATGTGGTTTG GTATTCTTTT TGCTGTTATT GGAGCGTTAT TAATTGAAAA ATTAAGGACT TCGTTTTCTA ATTATCAAGA AATTGCAATT CCTATTATAA TGAGCGCTGG TATTGCTCTA AGTGCTATTT TTATTTCTCT AGCAGATGGT TTTAATCAAG AAATCGTAGG CCTACTATTT GGATCAATTA GTGCAGTAAA TATTAGTGAT TTAACTACAA TTATTATCAT TACAATAATT GTTCTCATAT TTATTGTTTT ATTTTATAAA GAATTGTTTA TTTTATCATT TGACGAAGAA TATAGTAAGG TCATAGGTAT ACCAAAGTGG ATTCAATTTT TATTTATAGT AATTGTTGCT ATGGTAATAT CTGCATCAAT GAGAGTTGTA GGTATATTAT TAGTAAGCGC GTTAATAACT CTTCCTATAG CAATTTCAAT GAGAATAACT AAAGGATTTA AACAATTAAT AGCATTAAGT GTTATATTAG GAGAATTATC TGTAATTCTA GGATTAATTA TAGCTTTTTA TATGAATATA TCACCTGGTG GCGTCATTGT TGTACTATTG GTATTAATGC TCATACTAAC GATGATTATT CAGAAGTTAA AAATTAAGTT TAAAAAGGGA GTCGTTTAA
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Protein sequence | MIDALLNFDF IRYSLISGLL IGFIAPLIGA FIVVRRLSLI ADALSHVTLG GISFGMFLLT IIPVFSVINP MWFGILFAVI GALLIEKLRT SFSNYQEIAI PIIMSAGIAL SAIFISLADG FNQEIVGLLF GSISAVNISD LTTIIIITII VLIFIVLFYK ELFILSFDEE YSKVIGIPKW IQFLFIVIVA MVISASMRVV GILLVSALIT LPIAISMRIT KGFKQLIALS VILGELSVIL GLIIAFYMNI SPGGVIVVLL VLMLILTMII QKLKIKFKKG VV
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