Gene SERP1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1103 
SymbolaroK 
ID3240960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1147009 
End bp1147506 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content29% 
IMG OID637167756 
Productshikimate kinase 
Protein accessionYP_188679 
Protein GI57867056 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.396409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTATTA TTTTAGTTGG TTTCATGGGA ACTGGTAAAA CTACTGTTGG AAAATATCTT 
TCAGATTTAT ATAATTTAAG TTATGTGGAT TTAGATAATT TTATTGAAGT AAATGAATGT
AAATCTATAC CTAATATATT TAATGATATC GGAGAAAAAG GATTTAGATC ATTGGAGACT
AGATACCTAA AATCTTGTCT CAATACTTTC GATATTATTT CAACTGGAGG AGGTATTATA
GAAGATACGA ATTCATTAAA GCTCTTAAAA AATCAAAAGC ATGTAGTTTG GCTAGACTGT
GACATTGAAA TCATTTTCAA ACGAGTTAAA AATGATTCAC ATAGACCCAA TGCTAAAAGT
AAAAATCTTA ACCAACTTGA TGCCTTGTAT TCTTCAAGAC TTTCAAGATA TAATGAAATC
GCATTCATGA AAGTTGATAG TGCACAGAGT GTTTCTGAAA TTTGCACTTT AATTAAAACA
AAATTATTAA GCGATTGA
 
Protein sequence
MPIILVGFMG TGKTTVGKYL SDLYNLSYVD LDNFIEVNEC KSIPNIFNDI GEKGFRSLET 
RYLKSCLNTF DIISTGGGII EDTNSLKLLK NQKHVVWLDC DIEIIFKRVK NDSHRPNAKS
KNLNQLDALY SSRLSRYNEI AFMKVDSAQS VSEICTLIKT KLLSD