Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1071 |
Symbol | gnd |
ID | 3242766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1116266 |
End bp | 1117672 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637167725 |
Product | 6-phosphogluconate dehydrogenase |
Protein accession | YP_188648 |
Protein GI | 57866991 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAC AAATTGGAGT AGTGGGTTTA GCAGTAATGG GGAAAAACCT AGCTTGGAAT ATTGAATCAC GTGGTTATAG TGTTTCTGTT TATAACCGAT CAAGACAAAA AACTGATGAA ATGGTTAAAG AATCGCCTGG AAGAGAAATT TACCCAACAT ACTCATTAGA AGAATTTGTA GAATCTTTAG AGAAACCTCG TAAGATTTTA TTAATGGTAA AAGCTGGACC TGCAACAGAT GCCACTATAG ATGGTTTATT ACCTTTATTA GACGATGATG ATATTTTAAT TGATGGTGGT AATACTAATT ACCAAGATAC GATTCGTCGA AATAAAGCTT TAGCTGAAAG TAGTATTAAC TTTATTGGTA TGGGAGTTTC TGGTGGAGAA ATCGGCGCAC TCACGGGCCC TTCTTTAATG CCAGGTGGTC AAAAAGATGC TTATAACAAA GTCAGCGATA TCTTGGACGC AATTGCTGCT AAGGCACAAG ATGGTGCTTC ATGTGTAACT TACATTGGCC CTAATGGTGC AGGACATTAT GTTAAGATGG TACACAATGG TATCGAATAT GCAGATATGC AATTAATTGC TGAAAGTTAT GCAATGATGA AAGATTTATT AGGCATGTCA CATAAAGAAA TTTCTCAAAC TTTTAAAGAA TGGAATGCTG GAGAACTTGA AAGTTATTTA ATAGAAATTA CAGGTGATAT TTTCAATAAA TTAGATGATG ACAATGAAGC ACTTGTAGAA AAAATATTAG ATACTGCAGG TCAAAAAGGC ACAGGTAAAT GGACTTCAAT TAACGCACTA GAATTAGGTG TTCCTTTAAC AATCATTACA GAATCTGTAT TTGCGAGATT CATCTCATCA ATTAAAGAAG AACGTGTTAC TGCTTCTAAA TCTTTAAAAG GACCTAAAGC ACATTTTGAA GGCGATAAAA AAACATTCTT AGAAAAAATA CGTAAGGCAC TTTATATGAG TAAAATATGC TCATATGCAC AAGGTTTCGC TCAAATGAGA AAAGCCAGTG AAGATAATGA GTGGAATTTG AAATTAGGCG AATTAGCAAT GATTTGGCGT GAAGGTTGTA TTATTCGTGC ACAATTCCTA CAAAAAATTA AAGATGCCTA CGATAATAAT GAAAACTTAC AAAACTTATT ATTAGACCCT TACTTCAAAA ACATTGTTAT GGAATATCAA GATGCACTAC GTGAAGTAGT AGCTACTAGC GTGTACAATG GCGTGCCAAC ACCTGGTTTT TCAGCAAGTA TAAATTATTA TGATAGTTAT CGCTCAGAGG ATTTACCTGC AAACTTAATT CAAGCACAAC GTGATTACTT TGGCGCACAT ACTTATGAAC GTAAAGACCG TGAAGGTATT TTCCATACAC AATGGGTAGA AGAATAA
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Protein sequence | MTQQIGVVGL AVMGKNLAWN IESRGYSVSV YNRSRQKTDE MVKESPGREI YPTYSLEEFV ESLEKPRKIL LMVKAGPATD ATIDGLLPLL DDDDILIDGG NTNYQDTIRR NKALAESSIN FIGMGVSGGE IGALTGPSLM PGGQKDAYNK VSDILDAIAA KAQDGASCVT YIGPNGAGHY VKMVHNGIEY ADMQLIAESY AMMKDLLGMS HKEISQTFKE WNAGELESYL IEITGDIFNK LDDDNEALVE KILDTAGQKG TGKWTSINAL ELGVPLTIIT ESVFARFISS IKEERVTASK SLKGPKAHFE GDKKTFLEKI RKALYMSKIC SYAQGFAQMR KASEDNEWNL KLGELAMIWR EGCIIRAQFL QKIKDAYDNN ENLQNLLLDP YFKNIVMEYQ DALREVVATS VYNGVPTPGF SASINYYDSY RSEDLPANLI QAQRDYFGAH TYERKDREGI FHTQWVEE
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