Gene SERP1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1071 
Symbolgnd 
ID3242766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1116266 
End bp1117672 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content35% 
IMG OID637167725 
Product6-phosphogluconate dehydrogenase 
Protein accessionYP_188648 
Protein GI57866991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0362] 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAC AAATTGGAGT AGTGGGTTTA GCAGTAATGG GGAAAAACCT AGCTTGGAAT 
ATTGAATCAC GTGGTTATAG TGTTTCTGTT TATAACCGAT CAAGACAAAA AACTGATGAA
ATGGTTAAAG AATCGCCTGG AAGAGAAATT TACCCAACAT ACTCATTAGA AGAATTTGTA
GAATCTTTAG AGAAACCTCG TAAGATTTTA TTAATGGTAA AAGCTGGACC TGCAACAGAT
GCCACTATAG ATGGTTTATT ACCTTTATTA GACGATGATG ATATTTTAAT TGATGGTGGT
AATACTAATT ACCAAGATAC GATTCGTCGA AATAAAGCTT TAGCTGAAAG TAGTATTAAC
TTTATTGGTA TGGGAGTTTC TGGTGGAGAA ATCGGCGCAC TCACGGGCCC TTCTTTAATG
CCAGGTGGTC AAAAAGATGC TTATAACAAA GTCAGCGATA TCTTGGACGC AATTGCTGCT
AAGGCACAAG ATGGTGCTTC ATGTGTAACT TACATTGGCC CTAATGGTGC AGGACATTAT
GTTAAGATGG TACACAATGG TATCGAATAT GCAGATATGC AATTAATTGC TGAAAGTTAT
GCAATGATGA AAGATTTATT AGGCATGTCA CATAAAGAAA TTTCTCAAAC TTTTAAAGAA
TGGAATGCTG GAGAACTTGA AAGTTATTTA ATAGAAATTA CAGGTGATAT TTTCAATAAA
TTAGATGATG ACAATGAAGC ACTTGTAGAA AAAATATTAG ATACTGCAGG TCAAAAAGGC
ACAGGTAAAT GGACTTCAAT TAACGCACTA GAATTAGGTG TTCCTTTAAC AATCATTACA
GAATCTGTAT TTGCGAGATT CATCTCATCA ATTAAAGAAG AACGTGTTAC TGCTTCTAAA
TCTTTAAAAG GACCTAAAGC ACATTTTGAA GGCGATAAAA AAACATTCTT AGAAAAAATA
CGTAAGGCAC TTTATATGAG TAAAATATGC TCATATGCAC AAGGTTTCGC TCAAATGAGA
AAAGCCAGTG AAGATAATGA GTGGAATTTG AAATTAGGCG AATTAGCAAT GATTTGGCGT
GAAGGTTGTA TTATTCGTGC ACAATTCCTA CAAAAAATTA AAGATGCCTA CGATAATAAT
GAAAACTTAC AAAACTTATT ATTAGACCCT TACTTCAAAA ACATTGTTAT GGAATATCAA
GATGCACTAC GTGAAGTAGT AGCTACTAGC GTGTACAATG GCGTGCCAAC ACCTGGTTTT
TCAGCAAGTA TAAATTATTA TGATAGTTAT CGCTCAGAGG ATTTACCTGC AAACTTAATT
CAAGCACAAC GTGATTACTT TGGCGCACAT ACTTATGAAC GTAAAGACCG TGAAGGTATT
TTCCATACAC AATGGGTAGA AGAATAA
 
Protein sequence
MTQQIGVVGL AVMGKNLAWN IESRGYSVSV YNRSRQKTDE MVKESPGREI YPTYSLEEFV 
ESLEKPRKIL LMVKAGPATD ATIDGLLPLL DDDDILIDGG NTNYQDTIRR NKALAESSIN
FIGMGVSGGE IGALTGPSLM PGGQKDAYNK VSDILDAIAA KAQDGASCVT YIGPNGAGHY
VKMVHNGIEY ADMQLIAESY AMMKDLLGMS HKEISQTFKE WNAGELESYL IEITGDIFNK
LDDDNEALVE KILDTAGQKG TGKWTSINAL ELGVPLTIIT ESVFARFISS IKEERVTASK
SLKGPKAHFE GDKKTFLEKI RKALYMSKIC SYAQGFAQMR KASEDNEWNL KLGELAMIWR
EGCIIRAQFL QKIKDAYDNN ENLQNLLLDP YFKNIVMEYQ DALREVVATS VYNGVPTPGF
SASINYYDSY RSEDLPANLI QAQRDYFGAH TYERKDREGI FHTQWVEE