Gene SERP1044 details

Gene Information

• Locus tag: SERP1044
• Symbol: rpsA
• ID: 3242778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1089517
• End bp: 1090695
• Gene Length: 1179 bp
• Protein Length: 392 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637167698
• Product: 30S ribosomal protein S1
• Protein accession: YP_188621
• Protein GI: 57867003
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0539] Ribosomal protein S1
• TIGRFAM ID: [TIGR00717] ribosomal protein S1

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAAG AATTCAATGA ATCAATGATT AATGATATTA AAGAAGGTGA CAAAGTCACT 
GGTGAAGTTC AACAAGTAGA GGATAAACAA GTTGTTGTGC ATATTAATGG TGGCAAATTT 
AATGGAATTA TTCCTATTAG CCAGCTTTCA ACACATCATA TCGAAAACCC TAGTGAAGTT 
GTAAAAGTCG GTGATGAAGT CGAAGCATAT GTCACTAAAA TCGAGTTCGA CGAAGAAAAT 
GATACTGGGG CATACATTTT ATCAAAAAGA CAACTTGAAA CTGAAAAATC TTATGAATAT 
TTACAAGAAA AACTAGATAA CGATGAAGTG ATTGAAGCTG AAGTTACTGA AGTAGTTAAA 
GGTGGTTTAG TCGTTGACGT TGGTCAAAGA GGGTTTGTAC CTGCTTCTCT AATTTCAACT 
GATTTCATTG AAGATTTTTC TGTATTCGAT GGTCAAACAA TCCGTATTAA AGTGGAAGAA 
CTTGATCCTG AAAACAATAG AGTCATTTTA AGCCGTAAAG CTGTGGAACA GTTAGAAAAC 
GACGCTAAAA AAGCTTCAAT ATTAGATTCT TTAAATGAAG GCGATGTTAT TGATGGTAAA 
GTTGCTCGAT TAACTAACTT TGGTGCTTTC ATTGATATTG GTGGCGTAGA TGGTTTAGTT 
CACGTTTCTG AATTATCTCA TGAACATGTT CAAACACCAG AAGAAGTTGT GTCAGTAGGT 
GAAGCAGTCA AAGTTAAAGT TAAATCTGTA GAAAAAGATT CTGAACGTAT TTCTTTATCT 
ATTAAAGACA CTTTACCAAC ACCATTTGAA AACATTAAAG GGAAATTTCA CGAAGATGAT 
GTTATTGAAG GTACTGTAGT ACGTTTGGCG AACTTTGGCG CATTCGTAGA AATTGCTCCA 
TCCGTCCAAG GTTTAGTGCA TATTTCTGAA ATCGATCATA AACATATCGG TTCTCCTAAC 
GAAGTATTAG AACCTGGACA ACAAGTTAAT GTAAAAATAT TAGGTATCGA TGAAGATAAT 
GAAAGAATTT CATTATCAAT CAAAGCAACG TTACCTAAAG AAAATGTCAT TGAAAGTGAC 
GCATCCACAA CTCAATCATA TCTTGAAGAT GATAATGATG AAGATAAACC AACATTAGGC 
GATGTTTTTG GTGATAAATT TAAAGACCTT AAGTTTTAA 

 

Protein sequence

MTEEFNESMI NDIKEGDKVT GEVQQVEDKQ VVVHINGGKF NGIIPISQLS THHIENPSEV 
VKVGDEVEAY VTKIEFDEEN DTGAYILSKR QLETEKSYEY LQEKLDNDEV IEAEVTEVVK 
GGLVVDVGQR GFVPASLIST DFIEDFSVFD GQTIRIKVEE LDPENNRVIL SRKAVEQLEN 
DAKKASILDS LNEGDVIDGK VARLTNFGAF IDIGGVDGLV HVSELSHEHV QTPEEVVSVG 
EAVKVKVKSV EKDSERISLS IKDTLPTPFE NIKGKFHEDD VIEGTVVRLA NFGAFVEIAP 
SVQGLVHISE IDHKHIGSPN EVLEPGQQVN VKILGIDEDN ERISLSIKAT LPKENVIESD 
ASTTQSYLED DNDEDKPTLG DVFGDKFKDL KF