Gene SERP1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1012 
Symbol 
ID3242043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1054324 
End bp1055202 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content33% 
IMG OID637167666 
Product5'-3' exonuclease, putative 
Protein accessionYP_188589 
Protein GI57866934 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.667651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAAA GAGTATTGCT CGTTGATGGA ATGGCTTTAT TATTTAGACA TTTTTATGCA 
ACAAGCTTAC ACAATCAATT TATGTACAAT TCTAAAGGAA TTCCTACAAA TGGTATTCAA 
GGTTTTGTAA GACATATTTT TAGCGCTATC AAGGAAATCG AACCTACTCA CGTAGCAGTT 
TGTTGGGATA TGGGGCAAGA AACATTCAGA AATGAAATGT ATGATGGCTA TAAACAAAAT 
CGCCCAGCAC CTCCTGATGA ACTTATTCCT CAATTCGATT ATGTTAAAGA AATATCCCAT 
CAGTTTGGTT TTGTAAATGT TGGTAAGCGT AATTATGAAG CTGATGATAT TATTGGCAGT 
TTAGCGGAAA CATATTCACA AGAACATGAA GTTTATATCA TTACCGGAGA CCGAGACTTA 
CTCCAATGCA TTAATCATAA TGTAGAAGTT TGGCTTATAA AAAAAGGTTT TACAATCTAT 
CAACGTTACA CGCTTGATCG TTTCATTGAT GAATACGGGC TTAATCCTCA ACAATTAATA 
GATGTTAAAG CTTTTATGGG TGATACAGCA GATGGCTATT CTGGTGTAAA AGGGATAGGT 
GAAAAAACAG CAATTAAATT AATTCAAAAT CATGGAACTG TCGAAAATGT AGTGAACAAT 
TTATCATCAT TAACTCCCGC TCAACAGAAA AAAATAACAA ATAATTTAAA TCATCTGCAT 
TTATCAAAAT CACTCGCAGA AATATATACC AAAGTTCCAA TTGAAACAGA CAAACTTTTT 
AAAGAGATGA CATATGCTCA TACACTAAAT GAGATTTTAT CCATTTGTAA TGAACATGAA 
CTATACGTTT CAAGTAAATA TATTGCAACT CACCTCTAA
 
Protein sequence
MPQRVLLVDG MALLFRHFYA TSLHNQFMYN SKGIPTNGIQ GFVRHIFSAI KEIEPTHVAV 
CWDMGQETFR NEMYDGYKQN RPAPPDELIP QFDYVKEISH QFGFVNVGKR NYEADDIIGS 
LAETYSQEHE VYIITGDRDL LQCINHNVEV WLIKKGFTIY QRYTLDRFID EYGLNPQQLI 
DVKAFMGDTA DGYSGVKGIG EKTAIKLIQN HGTVENVVNN LSSLTPAQQK KITNNLNHLH 
LSKSLAEIYT KVPIETDKLF KEMTYAHTLN EILSICNEHE LYVSSKYIAT HL