Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0985 |
Symbol | sucB |
ID | 3242078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1001204 |
End bp | 1002466 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637167640 |
Product | dihydrolipoamide succinyltransferase |
Protein accession | YP_188563 |
Protein GI | 57866886 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.52706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGG TAAAAGTTCC AGAATTAGCA GAATCAATCA CAGAGGGTAC CATTGCAGAA TGGTTAAAAA ATGTAGGCGA TAATGTAGAT AAAGGTGAAG CTATCTTAGA ACTAGAAACA GATAAAGTTA ACGTCGAAGT AGTTTCTGAA GAAGCTGGGG TATTATCAGA ACAATTAGCC GAGGAAGGCG ATACAGTTGA AGTAGGTCAA GCTGTAGCTG TAGTAGGAGA AGGACAAGTA AACACATCTA ACGATAGTTC TAACGAATCT TCACAAAAAG ATGAAGCTAA AGAGAAAGAA ACGCCAAAAC AATCTAACCC GAATTCTAGT GAAAGTGAAA ATACACAAGA TAATAGCCAG CAACGTATCA ATGCAACACC ATCTGCACGT CGACATGCGC GTAAAAATGG CGTTGATTTA AGCGAAGTAT CCGGAAAAGG CAATGATGTT CTAAGAAAAG ATGATGTTGA AAATAGTCAA AAATCTTCAA GTCAAACAGC TAAAAGTGAA AGCAAATCAC AAAACAGTGG TTCTAAACAA ACCAATAACA ATCCATCAAA ACCTGTTATT CGTGAAAAAA TGTCTCGACG CAAAAAAACT GCTGCAAAAA AATTATTAGA AGTATCAAAT CAAACAGCTA TGCTTACTAC ATTTAATGAA GTTGATATGA CAAACGTTAT GGATTTACGT AAACGTAAAA AAGAACAATT TATCAAAGAT CATGATGGTA CTAAATTAGG ATTTATGTCC TTCTTTACTA AAGCTGCCGT TGCAGCTCTC AAAAAATATC CTGAAGTAAA TGCTGAGATA GATGGCGATG ATATGATTAC TAAACAATTT TACGATATCG GCATTGCAGT ATCCACTGAC GATGGATTAC TCGTACCATT TGTTAGAGAT TGTGATAAGA AAAATTTTGC AGAAATTGAA CAAGAAATCG CTAATTTAGC CGTAAAAGCT CGTGATAAAA AATTAGGCCT TGATGACATG GTTAACGGTT CGTTTACCAT CACTAATGGC GGTATCTTTG GCTCAATGAT GAGTACACCG ATTATAAATG GTAATCAAGC AGCTATCTTA GGTATGCATT CAATTATTAC ACGCCCAATT GCAGTTGATA AAGATACAAT TGAAAATCGT CCAATGATGT ATATCGCATT AAGCTATGAT CATAGAATCA TCGATGGGAA AGAGGCTGTA GGATTCTTAA AAACCATTAA AGAACTCATT GAAAATCCTG AAGATTTATT ACTTGAATCA TAA
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Protein sequence | MAEVKVPELA ESITEGTIAE WLKNVGDNVD KGEAILELET DKVNVEVVSE EAGVLSEQLA EEGDTVEVGQ AVAVVGEGQV NTSNDSSNES SQKDEAKEKE TPKQSNPNSS ESENTQDNSQ QRINATPSAR RHARKNGVDL SEVSGKGNDV LRKDDVENSQ KSSSQTAKSE SKSQNSGSKQ TNNNPSKPVI REKMSRRKKT AAKKLLEVSN QTAMLTTFNE VDMTNVMDLR KRKKEQFIKD HDGTKLGFMS FFTKAAVAAL KKYPEVNAEI DGDDMITKQF YDIGIAVSTD DGLLVPFVRD CDKKNFAEIE QEIANLAVKA RDKKLGLDDM VNGSFTITNG GIFGSMMSTP IINGNQAAIL GMHSIITRPI AVDKDTIENR PMMYIALSYD HRIIDGKEAV GFLKTIKELI ENPEDLLLES
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