Gene SERP0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0985 
SymbolsucB 
ID3242078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1001204 
End bp1002466 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content35% 
IMG OID637167640 
Productdihydrolipoamide succinyltransferase 
Protein accessionYP_188563 
Protein GI57866886 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID[TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.52706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGG TAAAAGTTCC AGAATTAGCA GAATCAATCA CAGAGGGTAC CATTGCAGAA 
TGGTTAAAAA ATGTAGGCGA TAATGTAGAT AAAGGTGAAG CTATCTTAGA ACTAGAAACA
GATAAAGTTA ACGTCGAAGT AGTTTCTGAA GAAGCTGGGG TATTATCAGA ACAATTAGCC
GAGGAAGGCG ATACAGTTGA AGTAGGTCAA GCTGTAGCTG TAGTAGGAGA AGGACAAGTA
AACACATCTA ACGATAGTTC TAACGAATCT TCACAAAAAG ATGAAGCTAA AGAGAAAGAA
ACGCCAAAAC AATCTAACCC GAATTCTAGT GAAAGTGAAA ATACACAAGA TAATAGCCAG
CAACGTATCA ATGCAACACC ATCTGCACGT CGACATGCGC GTAAAAATGG CGTTGATTTA
AGCGAAGTAT CCGGAAAAGG CAATGATGTT CTAAGAAAAG ATGATGTTGA AAATAGTCAA
AAATCTTCAA GTCAAACAGC TAAAAGTGAA AGCAAATCAC AAAACAGTGG TTCTAAACAA
ACCAATAACA ATCCATCAAA ACCTGTTATT CGTGAAAAAA TGTCTCGACG CAAAAAAACT
GCTGCAAAAA AATTATTAGA AGTATCAAAT CAAACAGCTA TGCTTACTAC ATTTAATGAA
GTTGATATGA CAAACGTTAT GGATTTACGT AAACGTAAAA AAGAACAATT TATCAAAGAT
CATGATGGTA CTAAATTAGG ATTTATGTCC TTCTTTACTA AAGCTGCCGT TGCAGCTCTC
AAAAAATATC CTGAAGTAAA TGCTGAGATA GATGGCGATG ATATGATTAC TAAACAATTT
TACGATATCG GCATTGCAGT ATCCACTGAC GATGGATTAC TCGTACCATT TGTTAGAGAT
TGTGATAAGA AAAATTTTGC AGAAATTGAA CAAGAAATCG CTAATTTAGC CGTAAAAGCT
CGTGATAAAA AATTAGGCCT TGATGACATG GTTAACGGTT CGTTTACCAT CACTAATGGC
GGTATCTTTG GCTCAATGAT GAGTACACCG ATTATAAATG GTAATCAAGC AGCTATCTTA
GGTATGCATT CAATTATTAC ACGCCCAATT GCAGTTGATA AAGATACAAT TGAAAATCGT
CCAATGATGT ATATCGCATT AAGCTATGAT CATAGAATCA TCGATGGGAA AGAGGCTGTA
GGATTCTTAA AAACCATTAA AGAACTCATT GAAAATCCTG AAGATTTATT ACTTGAATCA
TAA
 
Protein sequence
MAEVKVPELA ESITEGTIAE WLKNVGDNVD KGEAILELET DKVNVEVVSE EAGVLSEQLA 
EEGDTVEVGQ AVAVVGEGQV NTSNDSSNES SQKDEAKEKE TPKQSNPNSS ESENTQDNSQ
QRINATPSAR RHARKNGVDL SEVSGKGNDV LRKDDVENSQ KSSSQTAKSE SKSQNSGSKQ
TNNNPSKPVI REKMSRRKKT AAKKLLEVSN QTAMLTTFNE VDMTNVMDLR KRKKEQFIKD
HDGTKLGFMS FFTKAAVAAL KKYPEVNAEI DGDDMITKQF YDIGIAVSTD DGLLVPFVRD
CDKKNFAEIE QEIANLAVKA RDKKLGLDDM VNGSFTITNG GIFGSMMSTP IINGNQAAIL
GMHSIITRPI AVDKDTIENR PMMYIALSYD HRIIDGKEAV GFLKTIKELI ENPEDLLLES