| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0970 |
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| Symbol | lysA |
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| ID | 3241529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 988563 |
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| End bp | 989828 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637167625 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_188548 |
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| Protein GI | 57866856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAGTTA ATTATAACGA TAACGGCGAA CTGACAATGG GAGGTACAAG CTTAAAAACT
ATTGCACAAA GTTTTGGTAC ACCCTCGATT GTTTACGATG AAGACCAAAT TCGTAATCAG
ATAAGACGAT ATCATAAAGC ATTTGAAGCA AGTGGTTTAA GCTACAATAT ATCTTATGCC
TCAAAAGCTT TCACATGTAT TCAGATGGTC AAATTAATTG ATGAAGAAAA TTTACAATTA
GATGTTGTTT CTGAAGGTGA ACTTTATACT GCTCTTGAAG CAGGATTTGA TTCGAAACGT
ATTCACTTCC ATGGGAACAA CAAGACGAAA CGCGAGATTC AATATGCATT AGATAATCAG
ATTGGTTATT TTGTAGTGGA TACGCTCGAA GAAATAGATC TTATTGATAA ATATGCTGAT
AGTAATGTGG ATGTTGTATT ACGTGTGAAC CCTGGTGTTG AAGCACATAC ACATGAATTT
ATTCAAACTG GACAGGAAGA TAGTAAATTT GGATTATCAA TCAAACACGG TCTAGCATTA
AATGCAGTTA ATAAAGTAAA AGCAACGAAA CATTTGCAAC TTAAAGGAAT ACATTTCCAT
ATTGGCTCTC AAATCGAAGG CACTGAGGCG ATGATTAAGA CAGCTAAAAT TGTGCTTAAT
TGGTTAGCAA GTGAACGAAT TGAAGTGAGT TTGCTTAACA TAGGTGGTGG TTTCGGAATT
AAATATGTCG AAGGAGATGA AAGCTTCCCT ATTGAGCAAG GAATATCTGA AATTACTGAA
GCTATTAAAG AAACTGCACA AGCATTGCAG TACAATATTC CTGAAATTGG GATAGAACCT
GGCCGTTCAA TTGTTGGAGA AGCAGGTATC ACTTTATATG AGGTTGGTAC AATTAAAGAT
ATTCCTGGAG TTAATAAATA TGTATCAGTT GATGGCGGAA TGAGTGATCA CATACGAACT
GCACTTTATG GTGCACAGTA TGAGGCGTTG TTAGTTAACA GAAATGAAAA AGCTAATGAA
TCTGTAACAA TTGCAGGTAA ACTCTGTGAA TCTGGTGATA TTATCGTACG AGATGCTCAA
TTACCCTCTT CTGTTCATAG AGGTGATTAT CTAGCAGTAC TTTCTACTGG TGCGTATCAT
TATTCAATGG CTTCAAATTA TAATCAAATG CAAAAACCTT CAGTATTTTT CTTGAAAGAT
GGAAAAGCAC GTGAAGTGAT TAAACGTCAA TCATTGAGAC AATTAATTAT TAATGATACA
AAATAA
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| Protein sequence | MVVNYNDNGE LTMGGTSLKT IAQSFGTPSI VYDEDQIRNQ IRRYHKAFEA SGLSYNISYA
SKAFTCIQMV KLIDEENLQL DVVSEGELYT ALEAGFDSKR IHFHGNNKTK REIQYALDNQ
IGYFVVDTLE EIDLIDKYAD SNVDVVLRVN PGVEAHTHEF IQTGQEDSKF GLSIKHGLAL
NAVNKVKATK HLQLKGIHFH IGSQIEGTEA MIKTAKIVLN WLASERIEVS LLNIGGGFGI
KYVEGDESFP IEQGISEITE AIKETAQALQ YNIPEIGIEP GRSIVGEAGI TLYEVGTIKD
IPGVNKYVSV DGGMSDHIRT ALYGAQYEAL LVNRNEKANE SVTIAGKLCE SGDIIVRDAQ
LPSSVHRGDY LAVLSTGAYH YSMASNYNQM QKPSVFFLKD GKAREVIKRQ SLRQLIINDT
K
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