| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0967 |
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| Symbol | dapD |
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| ID | 3241526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 985453 |
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| End bp | 986175 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637167622 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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| Protein accession | YP_188545 |
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| Protein GI | 57866853 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
[TIGR03532] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACAAC ATTTATCAGC TCAAGAAATC ATTCAATATA TTAGCGATGC TAAGAAATCA
ACACCACTCA AAGTTTATGT AAATGGTCAT TTTGAAAATG TGACATTCCC AGAATCTTTT
AAAGTTTTTG GCTCTGAACA TTCAAAAGTA ATTTTCTGTG AAGCAGATGA ATGGAAACAA
TTTTATCAAA AAAATCATTC ATTAATCACT GAATTAGAAA TTGAGATGGA TCGTCGTAAT
TCAGCTATAC CGCTTAAAGA TTTAACAAAC ACAAATGCTC GTATTGAGCC AGGTGCGTTT
ATTCGTGAGC AAGCTATCAT TGAAGATGGT GCTGTGGTTA TGATGGGTGC TACGATTAAT
ATTGGAGCTA TTGTAGGTGA AGGAACAATG ATAGACATGA ACGCAACACT TGGTGGCCGA
GCTACAACAG GAAAAAATGT TCATGTTGGT GCAGGAGCTG TTTTAGCTGG TGTCATTGAA
CCTCCAAGTG CTTCCCCAGT TGTCATTGAA GACAATGTTT TAATTGGAGC AAATGCTGTT
ATTCTTGAAG GTGTACGCGT TGGTGCAGGA GCTATTGTAG CAGCAGGAGC TATTGTTACT
CAAGATGTGC CTGCTGGTGC TGTAGTTGCT GGTACGCCTG CTAAAGTAAT TAAACAAACT
TCAGAAGTTC AAGACTCAAA ACGTGAGATT GTGTCTGCAC TGCGTAAATT AAATAATGAA
TAA
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| Protein sequence | MVQHLSAQEI IQYISDAKKS TPLKVYVNGH FENVTFPESF KVFGSEHSKV IFCEADEWKQ
FYQKNHSLIT ELEIEMDRRN SAIPLKDLTN TNARIEPGAF IREQAIIEDG AVVMMGATIN
IGAIVGEGTM IDMNATLGGR ATTGKNVHVG AGAVLAGVIE PPSASPVVIE DNVLIGANAV
ILEGVRVGAG AIVAAGAIVT QDVPAGAVVA GTPAKVIKQT SEVQDSKREI VSALRKLNNE
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