Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0953 |
Symbol | |
ID | 3242027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 969316 |
End bp | 970317 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637167608 |
Product | peptide ABC transporter, permease protein, putative |
Protein accession | YP_188531 |
Protein GI | 57866918 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.353357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA TGATAATTTA TAAACTTTCA CAAATGATTG TCGTACTATT TATATTAACT ACAATCACAT TTATATTAAT GAAACTCTCT CCAGGTAATC CTGTAGACAA AATATTACAT CTTGATATTT CACATGTATC TCATGAGCAA ATAGAAACAA CAAAGAATAA GCTTGGCTTA AATGATTCTA TTTTTATTCA ATGGTTGCAC TGGTTAAATC AATTGTTTCA TTTTGATTTA GGAACAAGTT ATCAAACAAA TGAGCCTGTC ATCAGAGAAA TAGCAAATTA CCTTGGTCCT ACACTTATAA TTACTTTTGG TACGCTTATA ATGTCGTTAG TTATTTCTAT ACCATTAGGG ATTATAGCAG CGATTTACTA TCATAAAATT TGGGATAGGA TAATCCGTGT TATGACATCA TTATCCGTAA GCCTACCATC ATTTTTTATC GGTCTTATTT TATTATATAT ATTTAGTTTG AAGTTGAATG TTTTACCAAC GTCAGATGAG GGGCGTTTCG CTTCATATAT TTTACCAATA ATTACCATGA GTATTGGAAT GTGTGCTTAT TATATTCGAT TTATTCGTTC TACTTTATTA GAACAATATC AAACACCTAT AGTTGAATCG TCTCGTCTCA GAGGTATGCC CGAAAGATAT ATACTTTTTC AAGATATCCT TAAACCTACG ATACTACCAA TCATACCTCT ATTAGGATTA TCCATTGGGA GTTTGATAGG TGGAACAGTA GTCATTGAAA ATTTATTTGA TATTCCTGGG TTAGGCTATT TTTTAGTTGA TAGTATAAAG TCGAGAGATT ATCCAGTCAT TCAAGGTTGT GTATTATTTA TTGGTTTCTT TGTTGTGATT ATAAACACAA TTGCAGATTT ACTTTCATTA CTCATCGATC CTAAACAACG TTATACTATT ACTCAAAAAG AAACATTAAA GTTTAAATGG TTAAATTCAC ATAAAAAAGA AGGTCGTAAC GATGAAGTTT AA
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Protein sequence | MFKMIIYKLS QMIVVLFILT TITFILMKLS PGNPVDKILH LDISHVSHEQ IETTKNKLGL NDSIFIQWLH WLNQLFHFDL GTSYQTNEPV IREIANYLGP TLIITFGTLI MSLVISIPLG IIAAIYYHKI WDRIIRVMTS LSVSLPSFFI GLILLYIFSL KLNVLPTSDE GRFASYILPI ITMSIGMCAY YIRFIRSTLL EQYQTPIVES SRLRGMPERY ILFQDILKPT ILPIIPLLGL SIGSLIGGTV VIENLFDIPG LGYFLVDSIK SRDYPVIQGC VLFIGFFVVI INTIADLLSL LIDPKQRYTI TQKETLKFKW LNSHKKEGRN DEV
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