Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0952 |
Symbol | |
ID | 3242018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 968472 |
End bp | 969326 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167607 |
Product | peptide ABC transporter, permease protein, putative |
Protein accession | YP_188530 |
Protein GI | 57866909 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0427194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTA AATTGTCAAA GAAAAACACT ATATTTTTCA TTTTTACGGT CTATATTATA TGTCTTATTG TATTGCAATT TATAGTCAAT GATAAAGCTG CGTATCAGGT ACATTTGTCA AACTCATTTG AACCTATAAG TATGAATCAT TTACTTGGCA CAGATGATTA CGGACGTGAT TTATTCAGTC GTTTAGTCGT GGGCTCTCGT GCAACATTGT TTGTTACACT ACTTACTTTA CTGTTCACTG TTGTGGTTGG AGTACCTTTA GGGTTACTTG CAGGCTATAA AAAAGGTTGG GTTGATACGA TTATCATGCG AATTATTGAT ATAGGATTAA GCATACCAGA ATTCGTTATT ATGATTGCCT TAGCAAGTTT TTTTCATCCT AGTCTTTGGA ATTTGGTAAT AGCTATTACA ATCATAAAAT GGATGAATTA TACTCGTGTG ACAAGAGGGA TTGTCAATAC CGAAATGAAT CAATCGTATA TACAGATGGC ACAATATTTT AATGTCTCAA CTTTGAATAT CTTATTTAAA CACTTATTAC CAAAAGTTTT ACCATCAATA TTTGTTATTA TGATAGTTGA TTTTGGAAAA ATCATTTTAT ACATTAGTTC ATTATCATTT TTAGGTTTAG GTGCACAACC ACCATCTCCA GAGTGGGGGG CAATGTTACA AGCAGGGCGT GAATTTATTA CTTCACATCC TATCATGATT ATCGCTCCAG CATCTTTGAT ATCATGTACA ATATTGATAT TTAATTTAAC TGGTGATGCA GTAAGAGATC GTTTATTAGA ACAAAGAGGT GTAAAAGTTG AAACTTTTAA CAATAAAAAA TCTAAACATC AGTGA
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Protein sequence | MKFKLSKKNT IFFIFTVYII CLIVLQFIVN DKAAYQVHLS NSFEPISMNH LLGTDDYGRD LFSRLVVGSR ATLFVTLLTL LFTVVVGVPL GLLAGYKKGW VDTIIMRIID IGLSIPEFVI MIALASFFHP SLWNLVIAIT IIKWMNYTRV TRGIVNTEMN QSYIQMAQYF NVSTLNILFK HLLPKVLPSI FVIMIVDFGK IILYISSLSF LGLGAQPPSP EWGAMLQAGR EFITSHPIMI IAPASLISCT ILIFNLTGDA VRDRLLEQRG VKVETFNNKK SKHQ
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