Gene SERP0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0944 
Symbol 
ID3242010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand+ 
Start bp960583 
End bp961242 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content31% 
IMG OID637167599 
ProductThiJ/PfpI family protein 
Protein accessionYP_188522 
Protein GI57866901 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA AAGTTTTATT TGTTTTAACA AGTACAAGTC AATTTACAGA CGGTACAGAA 
ACTGGATTAT GGTTAGAAGA AGCTGGAGCA CCATATAATA TATTGACTGA AGAAGGTATC 
AATGTTGATG TTATTTCTAT TAAAGGTGGA AAAGTAAATC TTGATCCTAA TTCTGTTTCT 
AATGAATCAC TGAATCAGTA TGCTAAATTC GTGTCACACT TAAACGATAC ACCTAGTATC 
GAAAATGTAA ATGCAGATGA GTATGACGCT ATTTATCTAC CAGGTGGACA TGGTACTGTA 
TACGATTTTG CCAATAATGA GAAATTAGCT GATATTTTAC TTCAATTTAA AAATAGTAAT 
AAAATAATCT CTTCAGTATG TCATGGACCT AGTGTGTTTG TAGGTGTAAA AGATGCAAAT 
AATCACTATC TAGTAGATGG TGTCAAAATA ACTTCATTTA CTGATAGTGA AGAAAAAGCA 
ATGGGATTTG AAAATAAAGT ACCATTTTTA ACTCAATCTA AATTAGAAGA GCAAGGTGCA 
AATTTTGTAG TGAAAGATGA CTTTACATCT CACGTAGAAA AAGACGGTCA ATTTATCACT 
GGACAAAATC CCCAATCAAG TGAAGACATT GGTAAAGCAC TTGCAAATGA ATTAAAATAA
 
Protein sequence
MSKKVLFVLT STSQFTDGTE TGLWLEEAGA PYNILTEEGI NVDVISIKGG KVNLDPNSVS 
NESLNQYAKF VSHLNDTPSI ENVNADEYDA IYLPGGHGTV YDFANNEKLA DILLQFKNSN 
KIISSVCHGP SVFVGVKDAN NHYLVDGVKI TSFTDSEEKA MGFENKVPFL TQSKLEEQGA 
NFVVKDDFTS HVEKDGQFIT GQNPQSSEDI GKALANELK