Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0943 |
Symbol | trpA |
ID | 3242086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 959661 |
End bp | 960392 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637167598 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_188521 |
Protein GI | 57866894 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.669087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAT TATTCATTCC GTATATTATG GGTGATTTAA ATTTTATTCA TCATTTAAAA ACATTAACTG AGAATGGAGC AGACATTGTT GAAATTGGTG TGCCATTTTC TGATCCTGTT GCAGATGGAC CTATAATCAT GAAAGCAGGG CGCAACGCTA TTGACGAGGG TTCAAACATT AAATTCATTT TTGATGAATT AATAAAAAAT AAAAATACTA TTTCATCTAA GTATGTATTA ATGACTTATT ATAATATTCT AAGTGCTTAT GGAGAAGAAT TATTTTTGGA TAAGTGTGAT GAAGCTGGTG TTTATGGTTT AATTATTCCA GATTTACCTT ACGAACTTAC AAAAAAGTTT AAAAAAGATT TTTATCATCA TTCTGTTAAA ATAATATCGT TAATTGCCAT GACCGCAAGT GATGCTAGGA TTATGCAAAT TGCAAAGAAC TCAGAAGGAT TTATTTACAC GGTAACAATG AATGCCACAA CAGGTAACAG TGGGGAGTTC CATCCAGATT TAAAGAGAAA AATTGAATAT ATAAAAAAAG TTTCAAAAAT TCCTGTGGTT GCTGGATTTG GTATCAAAAA TCCTGAACAT GTTAAAGATA TAGCGTCCGT TGCAGATGGT ATTGTAATTG GTAGTGAAAT TGTAAAACGT ATTGAAATAG ATTCAAGAAA AGAATTTATC ACTTATATCA AATCAATAAG AACCACGTTG AATTCTTTAT AA
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Protein sequence | MSKLFIPYIM GDLNFIHHLK TLTENGADIV EIGVPFSDPV ADGPIIMKAG RNAIDEGSNI KFIFDELIKN KNTISSKYVL MTYYNILSAY GEELFLDKCD EAGVYGLIIP DLPYELTKKF KKDFYHHSVK IISLIAMTAS DARIMQIAKN SEGFIYTVTM NATTGNSGEF HPDLKRKIEY IKKVSKIPVV AGFGIKNPEH VKDIASVADG IVIGSEIVKR IEIDSRKEFI TYIKSIRTTL NSL
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