Gene SERP0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0943 
SymboltrpA 
ID3242086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp959661 
End bp960392 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content30% 
IMG OID637167598 
Producttryptophan synthase subunit alpha 
Protein accessionYP_188521 
Protein GI57866894 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0159] Tryptophan synthase alpha chain 
TIGRFAM ID[TIGR00262] tryptophan synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.669087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAT TATTCATTCC GTATATTATG GGTGATTTAA ATTTTATTCA TCATTTAAAA 
ACATTAACTG AGAATGGAGC AGACATTGTT GAAATTGGTG TGCCATTTTC TGATCCTGTT
GCAGATGGAC CTATAATCAT GAAAGCAGGG CGCAACGCTA TTGACGAGGG TTCAAACATT
AAATTCATTT TTGATGAATT AATAAAAAAT AAAAATACTA TTTCATCTAA GTATGTATTA
ATGACTTATT ATAATATTCT AAGTGCTTAT GGAGAAGAAT TATTTTTGGA TAAGTGTGAT
GAAGCTGGTG TTTATGGTTT AATTATTCCA GATTTACCTT ACGAACTTAC AAAAAAGTTT
AAAAAAGATT TTTATCATCA TTCTGTTAAA ATAATATCGT TAATTGCCAT GACCGCAAGT
GATGCTAGGA TTATGCAAAT TGCAAAGAAC TCAGAAGGAT TTATTTACAC GGTAACAATG
AATGCCACAA CAGGTAACAG TGGGGAGTTC CATCCAGATT TAAAGAGAAA AATTGAATAT
ATAAAAAAAG TTTCAAAAAT TCCTGTGGTT GCTGGATTTG GTATCAAAAA TCCTGAACAT
GTTAAAGATA TAGCGTCCGT TGCAGATGGT ATTGTAATTG GTAGTGAAAT TGTAAAACGT
ATTGAAATAG ATTCAAGAAA AGAATTTATC ACTTATATCA AATCAATAAG AACCACGTTG
AATTCTTTAT AA
 
Protein sequence
MSKLFIPYIM GDLNFIHHLK TLTENGADIV EIGVPFSDPV ADGPIIMKAG RNAIDEGSNI 
KFIFDELIKN KNTISSKYVL MTYYNILSAY GEELFLDKCD EAGVYGLIIP DLPYELTKKF
KKDFYHHSVK IISLIAMTAS DARIMQIAKN SEGFIYTVTM NATTGNSGEF HPDLKRKIEY
IKKVSKIPVV AGFGIKNPEH VKDIASVADG IVIGSEIVKR IEIDSRKEFI TYIKSIRTTL
NSL