Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0915 |
Symbol | |
ID | 3241517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 923527 |
End bp | 924699 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637167571 |
Product | IS256-like transposase |
Protein accession | YP_188494 |
Protein GI | 57866844 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.673092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAG TACATTTTAC ACTGAAAAGC GAAGAGATTC AAAGCATTAT TGAATATTCT GTAAAGGATG ACGTTTCTAA AAATATTTTA ACAACGGTAT TTAATCAACT AATGGAAAAT CAACGAACAG AATATATTCA AGCAAAAGAA TATGAACGAA CAGAAAACCG ACAAAGTCAA CGAAATGGCT ATTATGAGCG CAGCTTTACG ACACGTGTAG GCACGCTAGA ATTAAAAGTA CCCAGAACAC GTGATGGCCA TTTTTCACCC ACAGTGTTTG AACGTTATCA ACGAAACGAA AAAGCCCTCA TGGCTTCAAT GTTGGAAATG TATGTATCAG GCGTTTCAAC TCGTAAAGTA TCAAAAATTG TGGAAGAACT TTGTGGTAAA TCCGTCTCTA AGTCCTTCGT TTCTAGCTTA ACAGAACAGC TAGAACCTAT GGTTAACGAG TGGCAGAATC GTTTATTATC AGAAAAAAAT TATCCTTACT TAATGACCGA TGTACTCTAT ATAAAAGTAC GAGAAGAAAA TCGAGTACTC TCAAAAAGCT GTCATATAGC GATTGGAATA ACCAAAGATG GCGACCGTGA AATTATCGGC TTCATGATTC AAAGTGGCGA AAGCGAAGAG ACCTGGACAA CATTTTTTGA ATACCTAAAA GAACGCGGTT TACAAGGTAC GGAACTCGTT ATTTCTGATG CGCACAAAGG ATTAGTCTCT GCCATTAGAA AATCCTTCAC CAACGTAAGT TGGCAAAGAT GCCAAGTTCA CTTCCTAAGA AATATCTTTA CCACCATTCC TAAAAAAAAT TCAAAATCTT TCAGAGAAGC TGTTAAAGGA ATTTTTAAGT TCACAGATAT TAACTTAGCG CGTGAGGCTA AAAATCGATT GATTCATGAT TATATCGATC AACCAAAATA TTCAAAAGCT TGCGCATCAT TGGATGATGG ATTCGAAGAC GCCTTTCAAT ATACCGTACA AGGAAATTCC CACAATCGAC TAAAGAGTAC CAATCTAATT GAACGACTGA ATCAAGAAGT ACGCAGAAGA GAAAAGATTA TTCGCATCTT CCCCAATCAA ACATCAGCCA ATCGCTTAAT TGGAGCCGTT CTTATGGACC TACATGATGA ATGGATTTAT TCTTCAAGAA AATACATCAA TTTTGATAAG TAG
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Protein sequence | MTQVHFTLKS EEIQSIIEYS VKDDVSKNIL TTVFNQLMEN QRTEYIQAKE YERTENRQSQ RNGYYERSFT TRVGTLELKV PRTRDGHFSP TVFERYQRNE KALMASMLEM YVSGVSTRKV SKIVEELCGK SVSKSFVSSL TEQLEPMVNE WQNRLLSEKN YPYLMTDVLY IKVREENRVL SKSCHIAIGI TKDGDREIIG FMIQSGESEE TWTTFFEYLK ERGLQGTELV ISDAHKGLVS AIRKSFTNVS WQRCQVHFLR NIFTTIPKKN SKSFREAVKG IFKFTDINLA REAKNRLIHD YIDQPKYSKA CASLDDGFED AFQYTVQGNS HNRLKSTNLI ERLNQEVRRR EKIIRIFPNQ TSANRLIGAV LMDLHDEWIY SSRKYINFDK
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