Gene SERP0912 details

Gene Information

• Locus tag: SERP0912
• Symbol: tkt
• ID: 3241514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 920892
• End bp: 922880
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637167568
• Product: transketolase
• Protein accession: YP_188491
• Protein GI: 57866841
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.240506
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAATG AAAAAGATCA ATTAGCTATA GATACGATAC GTGCTTTAAG CATTGATGCA 
ATCGAAAAAG CAAATTCAGG ACACCCTGGA TTACCTATGG GAGCAGCACC TATGGCGTAT 
ACTTTATGGA CGCGCCACCT TAATTTTAAC CCTCAATCTA AAGATTTTTT TAATAGAGAT 
AGATTTATTC TATCAGCAGG TCATGGTTCG GCTTTATTGT ATAGCTTATT ACATGTCTCT 
GGTAGTTTAG AACTTGAAGA ACTTAAACAA TTTAGACAAT GGGGTTCGAA GACGCCTGGA 
CATCCAGAAT ATAGACATAC TGATGGCGTA GAAGTTACTA CTGGTCCATT AGGTCAAGGT 
TTTGCCATGT CTGTAGGGAT GGCGTTAGCA GAAAGTCATT TAGCAGGTAA ATTTAATAAG 
GACCAATTTG ATATAGTTAA TCATTACACT TATGTATTAG CGTCAGATGG TGACTTAATG 
GAAGGTATCT CACATGAAGC TGCATCTTTT GCAGGTCATA ATCAGTTAGA TAAATTAATT 
GTCCTTTATG ATTCAAATGA TATATCTTTA GATGGAGATT TAGATAAATC ATTTTCTGAA 
GATACAAAAC AGCGTTTCGA AGCCTATGGT TGGAACTATA TTCTAGTTGA AAATGGTAAC 
GATTTAGATG AGATTGATAA TGCAATCACT CAAGCTAAAT CACAACAAGG ACCTACTATT 
ATCGAAGTTA AAACTATTAT CGGTTTTGGT TCTCCTAATA AAGCTGGTTC AAATGGAGTT 
CATGGTGCCC CACTTGGTGA AGAAGAACGT GCACTTACAT TTAAAGAATA TGGATTAGAT 
CCTGAAAAAC GTTTTAATGT TCCTGAAGAT GTATACGAAA TATTTAAATC AACAATGTTA 
AAACGTGCAA ATGAAAATGA AGAGGCTTGG AATAATATGC TTAAAAATTA TAGTGAAGCC 
TATCCGGAAT TAGCTGAAGA ATTTAAATTA GCAATGAGTG GTAAGTTACC AAATAATTAC 
GCTGATGCCT TACCAGAATA TGATTTAAAT CACAGTGGTG CTTCTAGAGC TGATTCAGGA 
GAAATAATTC AAAAATTAAG CGAGTTTGTA CCTTCATTCT TTGGTGGATC AGCAGACTTA 
GCAGGTTCAA ATAAATCTAA CGTTAAAGAA GCTAAAGATT ATAATAAAGA TACTCCAGAA 
GGTAAAAACG TATGGTTTGG TGTACGTGAA TTTGCAATGG GAGCAGCAAT AAACGGCATG 
GCAGCACATG GTGGACTTCA TCCATATGCA GCAACATTCT TTGTATTCAG TGATTACCTA 
AAACCAGCTT TACGATTATC ATCAATCATG GGACTCAATT CAACGTTCAT CTTTACTCAT 
GATTCAATTG CTGTAGGTGA AGATGGCCCT ACACACGAAC CTATTGAACA ATTAGCAGGT 
CTTCGTGCTA TTCCTAACAT GAATGTTATT CGTCCAGCTG ATGGTAATGA AACACGTGTA 
GCTTGGGAAG TTGCACTTGA ATCAGAACAA ACACCAACAT CATTAGTGTT AACTCGTCAA 
AATTTACCAA CTTTGGATGT TGATAAACAA ACAGTTGAAA ATGGTGTGAG AAAAGGCGCA 
TATATTGTTT TTGAAACAGA ACAACAACTT GAATATTTAT TATTGGCATC TGGATCAGAA 
GTTAATTTAG CTGTAGAAGC CGCAAAAGAA TTAGAGCAAC AAGGTAAAGG TGTACGAGTT 
ATTTCTATGC CAAACTGGTA CGCATTTGAA CAACAATCTT CTGAATATAA AGAATCAATT 
TTACCTTCTG ATGTTACTAA ACGTATAGCT ATCGAAATGG CATCACCACT TGGTTGGCAT 
AAATATGTTG GAATTGAAGG TAAAGTCATT GGTATAAATA GTTTTGGCGC TAGTGCTCCT 
GGAGATTTAG TAGTTGAAAA GTATGGATTC ACTAAAGAAA ATATTTTAAA ACAAGTCCGT 
TCATTATAA 

 

Protein sequence

MFNEKDQLAI DTIRALSIDA IEKANSGHPG LPMGAAPMAY TLWTRHLNFN PQSKDFFNRD 
RFILSAGHGS ALLYSLLHVS GSLELEELKQ FRQWGSKTPG HPEYRHTDGV EVTTGPLGQG 
FAMSVGMALA ESHLAGKFNK DQFDIVNHYT YVLASDGDLM EGISHEAASF AGHNQLDKLI 
VLYDSNDISL DGDLDKSFSE DTKQRFEAYG WNYILVENGN DLDEIDNAIT QAKSQQGPTI 
IEVKTIIGFG SPNKAGSNGV HGAPLGEEER ALTFKEYGLD PEKRFNVPED VYEIFKSTML 
KRANENEEAW NNMLKNYSEA YPELAEEFKL AMSGKLPNNY ADALPEYDLN HSGASRADSG 
EIIQKLSEFV PSFFGGSADL AGSNKSNVKE AKDYNKDTPE GKNVWFGVRE FAMGAAINGM 
AAHGGLHPYA ATFFVFSDYL KPALRLSSIM GLNSTFIFTH DSIAVGEDGP THEPIEQLAG 
LRAIPNMNVI RPADGNETRV AWEVALESEQ TPTSLVLTRQ NLPTLDVDKQ TVENGVRKGA 
YIVFETEQQL EYLLLASGSE VNLAVEAAKE LEQQGKGVRV ISMPNWYAFE QQSSEYKESI 
LPSDVTKRIA IEMASPLGWH KYVGIEGKVI GINSFGASAP GDLVVEKYGF TKENILKQVR 
SL