Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0897 |
Symbol | hom |
ID | 3240409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 907781 |
End bp | 909061 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167553 |
Product | homoserine dehydrogenase |
Protein accession | YP_188476 |
Protein GI | 57866811 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000316275 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGT TAAATATCGC ATTACTTGGT TTGGGAACTG TCGGATCAGG TGTTGTAAAG ATTATTGAAG AGAATAGACA ACAGATTAAA GACACCATCA ATAAGGATAT TGTCATTAAA CATATTCTAG TCCGAGATAA ATCTAAGAAA CGTCCGTTAA ATATTAGTCA ATATCATCTT ACAGAAGATA TTAATGACAT CTTAAATGAC AATTCTATTG ATATAGTCGT TGAAGTTATG GGTGGTATTG AACCTACTGT TGATTGGTTA AGAACAGCCC TTAAAAATAA AAAACATGTG ATTACAGCAA ATAAGGACTT ACTAGCTGTC CATTTAAAAT TGTTAGAGGA CTTAGCTGAA GAAAATGGCG TCGCTCTTAA ATTTGAAGCA AGTGTGGCAG GTGGTATCCC CATTGTCAAT GCCATTAATA ATGGACTGAA TGCAAATAAT ATTTCTAAAT TTATGGGAAT ATTTAATGGA ACTTCTAACT TTATTCTCTC AAAAATGACT CATGAACAAA CAACTTTTAA AGATGCGTTA GAAGAAGCAC AAAGATTAGG ATTTGCTGAA GCTGATCCAA CAGATGATGT AGAAGGTGTA GATGCTGCAA GAAAGGTAGT TATTACATCT TATTTATCTT TTAACCAAGT CATTAAACTG AATGATGTTA AATTGGTAGG AATTAGTGAC ATTACATTAG CAGACATTAA TGCAGCAAGC GCATTAAATT ATAAAATTAA ATTAATAGGT AAAGGTACAT ATGAAAATGG ATATGTGAAT GCTTCAGTAG AACCGACACT GATACATAAG AATCACCAAC TTGCAGCTGT AGAGAACGAA TACAATGCAA TATATGTTAT AGGTGATGCT GTTGGCGATA CAATGTTTTA TGGTAAAGGT GCAGGTAGTT TAGCAACAGG AAGTGCAGTT GTAAGTGATT TATTAAATGT GGCACTTTTC TTTGAATCAA ACTTACACAC TTTACCACCT CATTTTGAAT TAAAGACAGA GGAAACTAAA GAAATGATGG ATGGTGCAGA ACCAGTGGTT ATTCAAGAGA AATCTAATTA CTATATAGTA ATTAGTAACA ATAATAAATC TTTGGAGAAA GTTGAATATG ACATTAAAAA GAAATTACCA TTCCATAAAT CGTTGCAACT TGTTGAGAGG GATCAAGATA CTTATGCAAT TATCGTTACT GGAATAGAAA CATCTCCAGA AAAAGTTCTA AATCAATCAG GATTTAATAT CAAGAAAGTT TATCCTGTAG AGGGAGTTTA A
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Protein sequence | MKELNIALLG LGTVGSGVVK IIEENRQQIK DTINKDIVIK HILVRDKSKK RPLNISQYHL TEDINDILND NSIDIVVEVM GGIEPTVDWL RTALKNKKHV ITANKDLLAV HLKLLEDLAE ENGVALKFEA SVAGGIPIVN AINNGLNANN ISKFMGIFNG TSNFILSKMT HEQTTFKDAL EEAQRLGFAE ADPTDDVEGV DAARKVVITS YLSFNQVIKL NDVKLVGISD ITLADINAAS ALNYKIKLIG KGTYENGYVN ASVEPTLIHK NHQLAAVENE YNAIYVIGDA VGDTMFYGKG AGSLATGSAV VSDLLNVALF FESNLHTLPP HFELKTEETK EMMDGAEPVV IQEKSNYYIV ISNNNKSLEK VEYDIKKKLP FHKSLQLVER DQDTYAIIVT GIETSPEKVL NQSGFNIKKV YPVEGV
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