| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0885 |
|---|
| Symbol | cls-1 |
|---|
| ID | 3242637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 897599 |
|---|
| End bp | 899071 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637167542 |
|---|
| Product | cardiolipin synthetase |
|---|
| Protein accession | YP_188465 |
|---|
| Protein GI | 57866786 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0361948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTG GATTTTTGGG TACCATTTTA ACTATATTGT TAGTAGTTGG GTTTATAACT
AACGTAGTAT TGGCATTTGT TATCATCTTC CTTGAACGTG ATCGACGTAC TGCCAGTTCA
ACTTGGGCGT GGTTATTCGT ATTATTCGTT CTTCCTGTCA TTGGATTTAT TTTGTATCTA
TTTTTAGGAC GAACGGTTTC CAAGAAAAAG ATGGAAAAAA ATAACGGTGA TGAATTACAT
GCATTTGAAG ATTTAGTTCA AGATCAAATC GACAGTTTTG ATAAACATAA TTATGGTTAT
ATCAATGATC AAGTCATTAA ACACCGTGAT TTAATACGTA TGTTGTTAAT GAAACAAGAT
GCCTTTTTAA CAGAAAATAA TAAAATCGAT TTATTTACAG ATGGTCATAA GCTTTATGAA
AAAGTACTTG AGGATATTTA CAATGCTCAA GACTATATAC ATTTAGAGTA CTATACCTTT
GAACTTGATG GATTAGGTAA AAGAATCTTA GATGCACTTG AAACTAAACT TAAAGAAGGT
TTAGAAGTTA AACTTTTGTA TGACGATGTT GGTTCTAAGA AGGTTAGATT ATCAAAATTT
AAACATTTCA GAGCATTAGG TGGAGAAGTT GAAGCATTTT TTCCTTCGAA AGTACCTTTA
ATCAATTTCA GAATGAATAA TCGAAATCAT AGAAAGATTA TCATTATAGA TGGACAAATT
GGTTACATTG GCGGTTTTAA TGTCGGCGAT GATTATTTAG GATTAGGTAA GTTAGGTTAC
TGGAGAGATA CACATACACG TGTTCAAGGT GAAGTTATCG ATGCACTACA ATTAAGATTT
ATTTTAGACT GGAATTCACA GTCGCATCGT CCACAATTTA AATTTGATCA AAAATACTTC
CCTAAAAAAA TTGGGGACAA AGGGAACGCG GCTATTCAAA TCGCTTCTAG TGGACCTGCA
TTTGATTTAC ATCAAATAGA ATATGGTTAT ACAAAAATGA TAATGAGCGC TAAAAAGTCT
ATCTATCTAC AAAGCCCTTA TTTTATTCCA GACCAATCAT ACATTAATGC ATTAAAAATG
GCTGCTAATA GTGGCGTTGA AGTAAACCTT ATGATACCGT GTAAACCTGA TCATCCATTC
GTTTATTGGG CTACATTTTC AAATGCAGCT GATTTATTAG ATAGCGGAGT TAATATTTAC
ACTTATCAAA ATGGATTTAT TCATTCTAAA ATATTAATGA TTGATGATGA AATTTCTTCA
ATTGGTAGTG CAAACATGGA CTTTAGAAGC TTTGAGCTGA ATTTCGAAGT GAACGCATTT
ATATATGATG AAGATATTGC TAAACAGTTA CGTCAAGCAT TTGAAAAAGA TATTGAGCAA
TCTAAATTAC TTACAAAAAA AGTATACGAC AAGCGTCCAT TATCAATTAA ATTTAAAGAA
GGACTAGCAA AATTAATATC TCCAATTTTA TAA
|
|---|
| Protein sequence | MNFGFLGTIL TILLVVGFIT NVVLAFVIIF LERDRRTASS TWAWLFVLFV LPVIGFILYL
FLGRTVSKKK MEKNNGDELH AFEDLVQDQI DSFDKHNYGY INDQVIKHRD LIRMLLMKQD
AFLTENNKID LFTDGHKLYE KVLEDIYNAQ DYIHLEYYTF ELDGLGKRIL DALETKLKEG
LEVKLLYDDV GSKKVRLSKF KHFRALGGEV EAFFPSKVPL INFRMNNRNH RKIIIIDGQI
GYIGGFNVGD DYLGLGKLGY WRDTHTRVQG EVIDALQLRF ILDWNSQSHR PQFKFDQKYF
PKKIGDKGNA AIQIASSGPA FDLHQIEYGY TKMIMSAKKS IYLQSPYFIP DQSYINALKM
AANSGVEVNL MIPCKPDHPF VYWATFSNAA DLLDSGVNIY TYQNGFIHSK ILMIDDEISS
IGSANMDFRS FELNFEVNAF IYDEDIAKQL RQAFEKDIEQ SKLLTKKVYD KRPLSIKFKE
GLAKLISPIL
|
|---|
| |