| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0860 |
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| Symbol | miaB |
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| ID | 3240403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 871516 |
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| End bp | 873060 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637167519 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_188442 |
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| Protein GI | 57866805 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.116218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATGAAG AGCAAAGAAA GGCTGGAACG ATAAATATTC TAGCTGAACG TGATCGTAAA
GCTGAGAAAG ATTATAGTAA ATACTTTGAA CAAGTGTATC AGCCACCTAG CTTAAAAGAA
GCTAAAAAAA GAGGAAAACA AGAAGTTCAA TATAACAGAG ATTTTCATAT AGATGAAAAA
TACAAAGGTA TGGGTAAAGG TCGCACTTTT TTAATTAAAA CATATGGATG TCAAATGAAT
GCACATGACA CTGAAGTTAT GGCAGGAATA TTAAATGCAT TAGGATATAG TGCTACTTCG
GATATTAATG AAGCGGATGT GATTTTAATT AATACATGCG CCATTAGAGA AAATGCTGAA
AATAAAGTCT TTAGTGAAAT AGGAAATTTA AAACATTTAA AAAAAGAACG CCCAGATTGT
TTAATTGGGG TGTGTGGTTG CATGTCTCAA GAAGAATCAG TCGTAAATAA AATATTAAAA
TCTTATCAAA ATGTAGATAT GGTTTTTGGG ACACACAACA TTCATCATTT ACCTGAGATT
TTAGAAGAGG CATATTTATC TAAAGCGATG GTAGTTGAAG TATGGTCTAA AGAGGGAGAC
ATCATCGAAA ATTTACCTAA AGTGCGTGAC GGTCACATTA AAGCTTGGGT TAATATTATG
TATGGTTGCG ATAAGTTTTG TACTTATTGT ATTGTTCCAT TTACTAGAGG AAAAGAACGT
AGTCGTCGTC CAGAGGACAT CATTGATGAG GTTAGAGAAT TAGCAAGAGA AGGTTATCAA
GAAATTACCT TATTAGGTCA AAATGTAAAT TCATATGGTA AAGATATCGA AGGTCTGGAT
TATGAATTAG GTGACTTATT GGAAGATATT TCTAAAATTG ATATACCTCG TGTTCGTTTT
ACAACAAGTC ATCCTTGGGA CTTTACAGAT CGAATGATTG AAGTTATAGC TAAAGGTGGG
AACATAGTAC CGCATATCCA TTTGCCGGTA CAATCAGGTA ATAACCAAGT ATTAAAGATA
ATGGGGCGTA AATATACAAG AGAGAGTTAT CTTGATTTAG TTTCAAGAAT AAAGGAAGCT
ATCCCTAACG TAGCTCTAAC TACTGATATC ATAGTAGGTT ATCCAAATGA AACTGAAGAA
CAATTTGAAG AAACATTATC ATTATATGAT GACGTTCAAT TTGAGCATGC ATACACATAT
TTATATTCAC AAAGAGATGG AACACCAGCA GCTAAAATGA AGGATAACGT ACCTTTAGAA
GTGAAAAAAG AACGTTTGCA AAGGCTTAAT AAGAAGGTTG GAATATATTC TCAACAAGCA
ATGAGTCAGT ATGAAGGTAA GATTGTTACG GTATTATGTG AAGGTTCTAG TAAAAAAGAT
GAGAATGTTC TAGCAGGCTA TACTGATAAA AATAAACTTG TGAATTTTAA AGGACCAAGA
GAGAGCATTG GTAAACTCGT TGATGTCAAA ATTGACGAGG CAAAACAATA TTCTTTAAAT
GGAACATTTA TACAAGAACA TCAACGTTCA ATGGTGACAC AATAA
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| Protein sequence | MNEEQRKAGT INILAERDRK AEKDYSKYFE QVYQPPSLKE AKKRGKQEVQ YNRDFHIDEK
YKGMGKGRTF LIKTYGCQMN AHDTEVMAGI LNALGYSATS DINEADVILI NTCAIRENAE
NKVFSEIGNL KHLKKERPDC LIGVCGCMSQ EESVVNKILK SYQNVDMVFG THNIHHLPEI
LEEAYLSKAM VVEVWSKEGD IIENLPKVRD GHIKAWVNIM YGCDKFCTYC IVPFTRGKER
SRRPEDIIDE VRELAREGYQ EITLLGQNVN SYGKDIEGLD YELGDLLEDI SKIDIPRVRF
TTSHPWDFTD RMIEVIAKGG NIVPHIHLPV QSGNNQVLKI MGRKYTRESY LDLVSRIKEA
IPNVALTTDI IVGYPNETEE QFEETLSLYD DVQFEHAYTY LYSQRDGTPA AKMKDNVPLE
VKKERLQRLN KKVGIYSQQA MSQYEGKIVT VLCEGSSKKD ENVLAGYTDK NKLVNFKGPR
ESIGKLVDVK IDEAKQYSLN GTFIQEHQRS MVTQ
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