| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0853 |
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| Symbol | |
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| ID | 3242642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 864062 |
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| End bp | 865621 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637167512 |
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| Product | phosphodiesterase |
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| Protein accession | YP_188435 |
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| Protein GI | 57866791 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.726014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTAT TAAGCCTCCT ACTCATTTTG CTGGGGATTA TTCTAGGCGT TGTTGTAGGG
TATATTGTTG CCCGAAATTT ATTACACCAA AAACAAGTTC AAGCAAGACA AACTGCCGAT
GATATTGTTA GCTATGCTAA TAAAGAAGCA GACAATATTA AAAAAGAAAA ATTACTTGAG
GCAAAAGAAG AGAACCAAAT TTTAAAAGAA CAAGCTGAGA ATGAACTGCG TGAAAGACGT
GGTGAACTTC AAAGACAAGA AACCCGACTT CTTCAAAAAG AAGAAAATTT GGATCGGAAA
TCTGATCTTT TAGATAAAAA AGATGAGATT TTGGAACAAA AAGAATCAAA ACTTGAAGAA
AGACAACAAC AAGTAGATGC AAAAGAGAGT AGTGTTCAAA CATTAATAAT GAAGCATGAA
CAAGAATTAG AACGCATCTC CGGTCTCACT CAAGAAGAAG CTGTGAAAGA ACAGCTTCAA
AGAGTTGAAG AAGAACTGTC ACAAGATATT GCAATACTTG TTAAAGAAAA AGAAAAAGAA
GCGAAAGAAA AAGTTGATAA GACAGCTAAA GAATTACTTG CTACAACTGT ACAAAGATTA
GCAGCCGAAC ATACAACTGA ATCAACTGTT TCAGTCGTAA ATCTGCCTAA CGATGAAATG
AAAGGTCGTA TCATAGGTAG AGAAGGTAGA AATATACGCA CATTAGAAAC ACTTACTGGC
ATAGATTTAA TTATTGATGA CACACCAGAA GCAGTTATTT TATCAGGTTT TGACCCAATT
AGACGTGAAA TTGCTAGAAC TGCACTAGTT AATTTGGTTT CTGATGGACG TATTCATCCT
GGACGTATTG AAGATATGGT CGAAAAAGCT AGAAAGGAAG TAGACGATAT CATTAGAGAT
GCTGGAGAAC AAGCTACCTT TGAAATAAAT GTACACAATA TGCATCCTGA TTTAGTGAAA
ATTTTGGGTC GATTAAATTA TCGAACTAGT TATGGTCAGA ATGTACTTAA ACATTCAATT
GAAGTTGCCC ACCTTTCAGG TATGCTTGCA GCAGAATTAG GAGAGGATGT TACTTTAGCT
AAACGTGCTG GATTATTACA TGATGTTGGT AAAGCCATTG ATCATGAAGT TGAAGGTAGT
CACGTAGAAA TAGGTGTTGA ATTAGCTAAG AAATATAATG AAAATAACAT AATTATTAAT
GCTATTCACT CACATCATGG TGATGTTGAA CCAACCTCTA TCATTTCTAT TTTAGTTGCA
GCAGCTGATG CATTATCAGC AGCGCGACCA GGTGCACGTA AAGAGACACT TGAAAATTAT
ATTAGAAGAC TTGAGAGACT CGAAACGTTA TCTGAAAGTT ATGATGGGGT AGAAAAAGCA
TTTGCTATAC AAGCTGGTAG AGAGATTCGT GTAGTCGTCT CACCTGAAGA AATTGATGAT
TTAAAATCAT ATAGATTGGC AAGAGATATT AAGAACCAAA TTGAAGAAGA GTTACAATAT
CCTGGACATA TCAAAGTGAC AGTTGTTCGA GAGACTAGAG CAATAGAATA TGCTAAATAA
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| Protein sequence | MNLLSLLLIL LGIILGVVVG YIVARNLLHQ KQVQARQTAD DIVSYANKEA DNIKKEKLLE
AKEENQILKE QAENELRERR GELQRQETRL LQKEENLDRK SDLLDKKDEI LEQKESKLEE
RQQQVDAKES SVQTLIMKHE QELERISGLT QEEAVKEQLQ RVEEELSQDI AILVKEKEKE
AKEKVDKTAK ELLATTVQRL AAEHTTESTV SVVNLPNDEM KGRIIGREGR NIRTLETLTG
IDLIIDDTPE AVILSGFDPI RREIARTALV NLVSDGRIHP GRIEDMVEKA RKEVDDIIRD
AGEQATFEIN VHNMHPDLVK ILGRLNYRTS YGQNVLKHSI EVAHLSGMLA AELGEDVTLA
KRAGLLHDVG KAIDHEVEGS HVEIGVELAK KYNENNIIIN AIHSHHGDVE PTSIISILVA
AADALSAARP GARKETLENY IRRLERLETL SESYDGVEKA FAIQAGREIR VVVSPEEIDD
LKSYRLARDI KNQIEEELQY PGHIKVTVVR ETRAIEYAK
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