Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0814 |
Symbol | sucD |
ID | 3242833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 817022 |
End bp | 817930 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637167473 |
Product | succinyl-CoA synthetase subunit alpha |
Protein accession | YP_188396 |
Protein GI | 57866714 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0497664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTAT TTATTGATAA AAATACGAAA GTAATGGTAC AAGGTATCAC AGGGTCTACT GCCCTTTTCC ATACAAAACA AATGCTTGAT TATGGGACAC AAATTGTTGC AGGGGTAACA CCTGGTAAAG GTGGACAAGT TGTAGAAGGT GTTCCAGTAT ATAACACTGT TGAAGAAGCT AAAAATGAAA CAGGAGCTAA TGTATCTGTT GTATACGTAC CAGCACCATT CGCTGCTGAT TCAATTATTG AAGCAGCTGA TGCCGATTTA GACATGGTTA TTTGTATTAC TGAACATATA CCTGTTGTTG ATATGGTTAA AGTAAAAAGA TATTTACAAG GTCGTAAAAC ACGTTTAGTA GGACCAAACT GTCCTGGTGT GATAACTGCC GACGAGTGTA AAATCGGTAT TATGCCGGGA TATATCCATA AAAAAGGCCA TGTCGGTGTC GTGTCTCGTT CTGGTACATT AACGTATGAG GCAGTGCATC AATTAACTGA AGAAGGTATC GGTCAAACAA CTGCTGTAGG TATCGGCGGT GATCCAGTAA ATGGGACTAA CTTTATTGAT GTTTTAAAGG CGTTCAATGA AGATTCTGAA ACTAAAGCCG TTGTAATGAT TGGAGAAATT GGTGGTACCG CAGAAGAAGA AGCGGCACAA TGGATTAAAG AAAATATGAA CAAACCTGTA GTAGGTTTTA TCGGCGGTCA GACAGCACCT CCAGGTAAAC GTATGGGTCA TGCTGGAGCT ATTATTTCAG GAGGTAAGGG TACAGCATCT GAAAAGATTA AAACATTAAA CGATTGTGGT GTTGAAACTG CAGATACACC TTCTGAAATA GGAACAACCC TTATTGATGC AGCTAAAAAA GCAGGCATTT ATGAAGAGTT ATTAACTATT AAAAAATAA
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Protein sequence | MSVFIDKNTK VMVQGITGST ALFHTKQMLD YGTQIVAGVT PGKGGQVVEG VPVYNTVEEA KNETGANVSV VYVPAPFAAD SIIEAADADL DMVICITEHI PVVDMVKVKR YLQGRKTRLV GPNCPGVITA DECKIGIMPG YIHKKGHVGV VSRSGTLTYE AVHQLTEEGI GQTTAVGIGG DPVNGTNFID VLKAFNEDSE TKAVVMIGEI GGTAEEEAAQ WIKENMNKPV VGFIGGQTAP PGKRMGHAGA IISGGKGTAS EKIKTLNDCG VETADTPSEI GTTLIDAAKK AGIYEELLTI KK
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