Gene SERP0788 details

Gene Information

• Locus tag: SERP0788
• Symbol: rpe
• ID: 3241573
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 788508
• End bp: 789152
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637167448
• Product: ribulose-phosphate 3-epimerase
• Protein accession: YP_188371
• Protein GI: 57866768
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0036] Pentose-5-phosphate-3-epimerase
• TIGRFAM ID: [TIGR01163] ribulose-phosphate 3-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAAAA TTTTACCATC ACTTTTATCT ATAGATTTTT TAAATTTAAA AGAAGAACTT 
CAATTGTTAG AAGCAGCCAA GGTAGACGGA TTACACTTTG ATGTGATGGA CGGTAAATTT 
GTCCCTAATA TTTCAATTGG TATTCCAATA TTGGATGCTG TTAGACAACA ATCTCATTTG 
CCAATAGATG TTCATTTAAT GATTGAACAA CCTGAAAATT ATATTAATCT TTTTGCTGAA 
CATGGTGCTG ATATGATTTC AGTCCATGTT GAGGCGACAA CACATATACA TAGGGCAATT 
GAACAAATTA AACAATTAGG GAAAAAAGCA GGTGTCGTCA TCAATCCCGG AACATCTGTA 
GAAACAATTT TACCTATATT GAGTATTGTT GATTATGTTT TAGTAATGAC TGTAAATCCT 
GGTTTTGGCG GACAAACATT CATAGAACAA TGCGTGACTA AGATTGAGCA ATTAAATCAA 
CTCAAACATG AAAATCATTT AACTTTTGAT ATTGAGGTAG ATGGAGGAAT TAACGATCAA 
ACGAGTAAAC GATGTGTAGA ACAGGGTGCT ACAATGTTAG TCACTGGTTC ATACTTCTTT 
AAACAAGAGG ATTATGCAAA AGTAACATCT TTATTAAAGG AATGA 

 

Protein sequence

MVKILPSLLS IDFLNLKEEL QLLEAAKVDG LHFDVMDGKF VPNISIGIPI LDAVRQQSHL 
PIDVHLMIEQ PENYINLFAE HGADMISVHV EATTHIHRAI EQIKQLGKKA GVVINPGTSV 
ETILPILSIV DYVLVMTVNP GFGGQTFIEQ CVTKIEQLNQ LKHENHLTFD IEVDGGINDQ 
TSKRCVEQGA TMLVTGSYFF KQEDYAKVTS LLKE