Gene SERP0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0783 
Symbolsun 
ID3241560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp782172 
End bp783479 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content31% 
IMG OID637167443 
Productsun protein 
Protein accessionYP_188366 
Protein GI57866755 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAT CAGTGCGAAC ATATGCATTA GAAACAATCA ATGACGTCTT AAATAAAGGT 
GCTTATAGTA ATTTAAAAAT TAATGAGGTT CTATCTACAA ATAACATTAA TACAGTAGAT
AAAAATTTGT TCACAGAATT AGTATATGGA ACACTAAAAA GAAAATACAC ATTAGATTAT
CTACTTAAGC CTTTTATCAA AACTAAAATC AAATCATGGG TACGACAATT ACTGTGGATG
AGTTTATATC AATATTTATA TTTAGATAAA ATACCTAACC ATGCTATTAT TCATGAAGCG
GTAGATATAG CAAAGAAACG CGGTGGCTAT CACACAGGGA ATATAGTCAA TGGTATATTA
CGAACAGTAA TGCGCACTGA ATTACCAAGC TTTGAAGATA TAGATGATAC TAAAAAAAGA
ATTGCAATTC AATACAGTCT TCCCAAATGG ATTGTTGATC ATTGGGTGAC GCATTTTGGA
ATAGAAAAAA CTGAAAACAT TGCACAATCT TTTTTAGAGC CTGTAGCTAC AACCGTGCGT
GCCAATATAT CTCGTGGTTC TATTGATTCA ATTATCTCTA AGTTAGAACA GGAAGGTTAC
CATGTTAAAA AAGACGATAT GTTACCATTT TGTCTTCATA TATCAGGCTT GCCTGTGGTT
AATTCAAACG CTTTTAAAGA AGGTTATATC TCTATTCAAG ATAAAAGTTC AATGATGGTA
GCTTATGTAA TGAACCTAGG GCGTGATGAT AAAGTTTTAG ATGCGTGTAG CGCACCTGGT
GGTAAAGCTT GTCATATGGC AGAAATTCTG TCACCAGAAG GTCACGTCGA TGCAACAGAT
ATTCATGAAC ATAAAATAAA TCTTATTAAA CAAAATATTA AAAAATTGAA ATTGAATAAT
ATCAAGGCTT TTCAACATGA TGCCACAGAA GTATACGATA AAATGTATGA TAAGATTCTT
GTTGATGCAC CGTGTAGTGG TTTAGGTGTT CTTAGACACA AACCTGAAAT TAAATATAGT
CAATCACAAA ATAGTATTAA GTCTTTAGTA GAATTACAAT TACAAATTTT AGAAAATGTT
AAAGATAATA TTAAACCTGG TGGTACAATA GTGTATTCAA CATGTACAAT AGAACAAATG
GAAAACGAAA ATGTCATCTA TACTTTTTTA AAGAGACATA AAGATTTTGA ATTTGAACCA
ATCCAAAATC CAGTAACTGG TGAACAAGTT AAAACGTTAC AGATACTTCC ACAAGATTTT
AATTCTGATG GATTCTTTAT TAGCAAGATA AAAAGAAAGG AAAGTTAG
 
Protein sequence
MMKSVRTYAL ETINDVLNKG AYSNLKINEV LSTNNINTVD KNLFTELVYG TLKRKYTLDY 
LLKPFIKTKI KSWVRQLLWM SLYQYLYLDK IPNHAIIHEA VDIAKKRGGY HTGNIVNGIL
RTVMRTELPS FEDIDDTKKR IAIQYSLPKW IVDHWVTHFG IEKTENIAQS FLEPVATTVR
ANISRGSIDS IISKLEQEGY HVKKDDMLPF CLHISGLPVV NSNAFKEGYI SIQDKSSMMV
AYVMNLGRDD KVLDACSAPG GKACHMAEIL SPEGHVDATD IHEHKINLIK QNIKKLKLNN
IKAFQHDATE VYDKMYDKIL VDAPCSGLGV LRHKPEIKYS QSQNSIKSLV ELQLQILENV
KDNIKPGGTI VYSTCTIEQM ENENVIYTFL KRHKDFEFEP IQNPVTGEQV KTLQILPQDF
NSDGFFISKI KRKES