| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0748 |
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| Symbol | murD |
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| ID | 3241404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 745384 |
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| End bp | 746733 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637167408 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_188331 |
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| Protein GI | 57866690 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00960622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTAAATT ACACTGAATT AGAAAATAAA AATGTTTTAG TAGTAGGCTT AGCAAAAAGT
GGATATGAAG CGGCGAAACT TCTCCTTAAA TTAGGTGCTA ACGTTAAAGT CAATGATGGA
AAGGATCTTT CACAGGATGC ACATGCTAAA GATTTAGAAT CTATGGGCAT TGAGGTAATT
AGCGGTAGTC ATCCTTTTTC TTTATTAGAT GATAATCCCA TCATTGTGAA AAATCCAGGT
ATTCCATATA CTGTATCAAT TATTGAAGAA GCAGCAAAAA GAGGGCTTAA AATCTTAACA
GAGGTTGAAC TTAGCTATTT AATTTCTGAG GCACCAATCA TAGCAGTTAC TGGAACTAAC
GGTAAAACAA CTGTCACTTC ACTAATCGGT GATATGTTCC AAAAAAGCGT GTTAACTGGA
CGGCTTTCTG GAAATATTGG TTATGTAGCC TCAAACGTTG CACAAGAAGT TAAATCAGAT
GAGTATTTAA TAACAGAATT ATCATCTTTT CAATTATTAG GTATTGAGAA ATATAAACCA
CATATCGCTA TCATTACAAA TATTTATTCT GCACATTTGG ATTACCATGA AACGTTAGAG
AACTATCAAA ATGCTAAAAA GCAAATATAT AAAAATCAAA CTAAAGATGA TTATCTTATT
TGTAATTATC ACCAAAGACA CCTAATTGAA TCAGAAAATC TAGAAGCAAA AACATTTTAT
TTTTCAACAC AGCAAGAAGT TGATGGGATA TACATTAAAG ATGGTTTCAT CGTTTTTAAC
GGCATTCGCA TTATTAACAC TAAAGACTTA GTACTACCGG GAGAACATAA CCTGGAAAAT
ATTTTAGCAG CTGTATTAGC ATCGATCATT GCTGGTGTGC CAGTCAAAGC TATTGTAGAT
AGTCTTGTTA CTTTTTCTGG TATTGATCAT AGACTTCAGT ATATTGGTAC AAATCGCACA
AATAAATATT ATAATGATTC AAAAGCAACT AATACTTTAG CTACTCAATT TGCGCTTAAC
TCTTTTGATC AACCAATTAT TTGGTTGTGT GGTGGATTAG ATCGTGGTAA TGAATTCGAT
GAACTTATTC CTTATATGGA AAATGTACGT GTGATGGTTG TTTTTGGAGA AACACAAGAT
AAATTTGCTA AATTGGGAAA TAGTCAAGGT AAGTATGTGA TTAAAGCAAC AGACGTAGAG
GATGCTGTTG ATAAAATTCA AGATATAGTC GAGCCCAATG ATGTTGTTTT ATTATCACCA
GCTTGTGCAA GTTGGGATCA GTATCATACA TTTGAAGAAC GTGGTGAGAA GTTTATCGAT
AGATTCCGAG CGCACTTGCC ATCATACTAA
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| Protein sequence | MLNYTELENK NVLVVGLAKS GYEAAKLLLK LGANVKVNDG KDLSQDAHAK DLESMGIEVI
SGSHPFSLLD DNPIIVKNPG IPYTVSIIEE AAKRGLKILT EVELSYLISE APIIAVTGTN
GKTTVTSLIG DMFQKSVLTG RLSGNIGYVA SNVAQEVKSD EYLITELSSF QLLGIEKYKP
HIAIITNIYS AHLDYHETLE NYQNAKKQIY KNQTKDDYLI CNYHQRHLIE SENLEAKTFY
FSTQQEVDGI YIKDGFIVFN GIRIINTKDL VLPGEHNLEN ILAAVLASII AGVPVKAIVD
SLVTFSGIDH RLQYIGTNRT NKYYNDSKAT NTLATQFALN SFDQPIIWLC GGLDRGNEFD
ELIPYMENVR VMVVFGETQD KFAKLGNSQG KYVIKATDVE DAVDKIQDIV EPNDVVLLSP
ACASWDQYHT FEERGEKFID RFRAHLPSY
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