Gene SERP0731 details

Gene Information

• Locus tag: SERP0731
• Symbol: sdhA
• ID: 3241368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 730806
• End bp: 732572
• Gene Length: 1767 bp
• Protein Length: 588 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637167390
• Product: succinate dehydrogenase flavoprotein subunit
• Protein accession: YP_188314
• Protein GI: 57866658
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.306166
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAGA AAAAAATTAT TGTTGTCGGT GGAGGACTAG CCGGTCTGAT GTCAACAATT 
AAAGCGGCAG AACAAGGTGC ACATGTAGAT TTATTTTCCA TTGTACCGGT AAAGCGTTCG 
CACTCTGTTT GTGCACAAGG TGGCATAAAT GGTGCTGTTA ATACTAAAGG TGAGGGAGAT 
TCACCGTGGA TTCACTTTGA TGATACTGTT TATGGTGGAG ACTTCCTGGC CAATCAACCA 
CCAGTCAAAG CAATGGCTGA TGCTGCACCT AAAATCATCC ATCTGTTAGA TCGCATGGGG 
GTTATGTTTA ACAGAACGAA AGAAGGTTTA TTAGACTTTA GACGTTTTGG CGGTACACTA 
CATCATAGAA CAGCATTTGC TGGCGCAACG ACAGGTCAAC AGTTACTCTA TGCATTAGAT 
GAGCAAGTTC GTTCATTTGA GGTGGATGGT TTAGTAACTA AATACGAAGG ATGGGAATTT 
CTAGGTATTG TTAAAGACGA AGAAGATGCT GCAAGAGGTA TTGTCGCTCA AAATATGACA 
ACATCAGAAA TTCAATCATT CGGTTCAGAC GCTGTTATCA TGGCAACAGG TGGTCCTGGT 
ATTATCTTTG GTAAAACGAC GAACTCAATG ATTAATACAG GTTCAGCGGC GTCCATCGTT 
TATCAGCAAG GTGCGATTTA TGCAAATGGT GAATTCATTC AAATACATCC GACTGCGATT 
CCAGGTGATG ACAAATTACG TCTTATGAGT GAATCAGCTC GTGGTGAAGG TGGCCGTATT 
TGGACGTATA AAGATGGTAA ACCTTGGTAC TTCTTAGAAG AAAAATATCC AGACTATGGT 
AACTTGGTTC CACGTGATAT AGCGACACGT GAAATTTTCG ATGTTTGTAT TAACCAAAAG 
TTAGGCATCA ATGGAGAAAA CATGGTATAC CTTGATTTAT CTCATAAAGA TCCACACGAA 
TTAGATGTTA AATTAGGTGG TATTATTGAA ATTTATGAAA AATTCACAGG TGATGATCCA 
CGTAAAGTTC CAATGAAGAT TTTCCCAGCA GTACATTATT CAATGGGTGG TTTATACGTA 
GATTATGATC AAATGACTAA TATCAAAGGG TTATTTGCAG CTGGAGAATG CGATTTCTCA 
CAACATGGTG GTAACCGTTT AGGTGCTAAT TCTTTACTTT CAGCTATTTA TGGAGGTACA 
GTAGCAGGTC CTAACGCTAT CAAATATGTT GAAAATGTTG AAAAATCGTA TACAGATTTA 
GATGACAGTA TTTTCGAAGC TCGTGTTAAA GAAGAGAAAG AAAAATTTGA TCATTTATTA 
AATATGCGTG GTACTGAAAA TGCTTATAAA CTTCACCGTG AATTAGGTGA AATTATGACA 
GCTAACGTAA CTGTGGTTCG TGAAAATGAA AAGTTACTTG AAACAGATAA AAAAATTCAA 
GAACTTATGA AACGTTATGA AGATATTGAT ATGGAAGATA CGCAAACATG GAGCAACCAA 
GCAGTATTCT TCACACGACA ATTATGGAAT ATGTTGGTTC TTGCTCGTGT GATTACGATT 
GGTGCGTATA ATCGTAACGA ATCTAGAGGT GCACATTACA AACCTGAATT CCCAGAACGT 
AATGATGAAG AATGGTTAAA AACAACCATG GCTCGTTATA AAGGTAGAAG TGAAAAGCCA 
GAATTTACTT ATGAGCCAGT AGATGTAAGT TTAATTCCAC CTCGTAAGCG TGACTACACA 
AGTAAGTCTA AAGGAGGTAA TAAATAA 

 

Protein sequence

MAEKKIIVVG GGLAGLMSTI KAAEQGAHVD LFSIVPVKRS HSVCAQGGIN GAVNTKGEGD 
SPWIHFDDTV YGGDFLANQP PVKAMADAAP KIIHLLDRMG VMFNRTKEGL LDFRRFGGTL 
HHRTAFAGAT TGQQLLYALD EQVRSFEVDG LVTKYEGWEF LGIVKDEEDA ARGIVAQNMT 
TSEIQSFGSD AVIMATGGPG IIFGKTTNSM INTGSAASIV YQQGAIYANG EFIQIHPTAI 
PGDDKLRLMS ESARGEGGRI WTYKDGKPWY FLEEKYPDYG NLVPRDIATR EIFDVCINQK 
LGINGENMVY LDLSHKDPHE LDVKLGGIIE IYEKFTGDDP RKVPMKIFPA VHYSMGGLYV 
DYDQMTNIKG LFAAGECDFS QHGGNRLGAN SLLSAIYGGT VAGPNAIKYV ENVEKSYTDL 
DDSIFEARVK EEKEKFDHLL NMRGTENAYK LHRELGEIMT ANVTVVRENE KLLETDKKIQ 
ELMKRYEDID MEDTQTWSNQ AVFFTRQLWN MLVLARVITI GAYNRNESRG AHYKPEFPER 
NDEEWLKTTM ARYKGRSEKP EFTYEPVDVS LIPPRKRDYT SKSKGGNK