| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0725 |
|---|
| Symbol | |
|---|
| ID | 3240751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 722554 |
|---|
| End bp | 723075 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637167384 |
|---|
| Product | bacteriocin production protein, putative |
|---|
| Protein accession | YP_188308 |
|---|
| Protein GI | 57866645 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATTG ATATAGTTGT TCTTATTATT ATTTGTTACT TTATAGTGAT AGGGTTTCGT
AGAGGTATTT GGTTATCGAT ATTGCATTTT GCTTCTTCAA TTGTATCTTT ATTTATTGCG
TCACAATATT ATCAATCTAT TGCGCAACGT TTAGTTGTTT TTGTGCCATT TCCTAAAACA
GTGGCGTTTG ATATGGTCTA TACTATACCT TATGATCATT TGCAATACAG ATTTGAAAAA
GTGATAGCAT TTATTATAAT ATTTGGTATG TGTAAGCTTA TTTTGTATCT AGTTGTTGTT
ACATTTGATA ATATAATAAC GTATAAAAAG ATACATTTAG TAAGTCGGAT ATCGAGTGTC
GTTTTGAGTA TCATAGCGGT TTTTATATAT TTACAAATTG GACTTTATTT ATTATCGCTA
TATCCGCATT CATTTATACA GTACCAATTA TCTCAATCGC TATTAAGTCG AGTTGTGATT
GAACAAATTC CTTATTTATC ACAATTTATT TTAAATTTAT AA
|
|---|
| Protein sequence | MLIDIVVLII ICYFIVIGFR RGIWLSILHF ASSIVSLFIA SQYYQSIAQR LVVFVPFPKT
VAFDMVYTIP YDHLQYRFEK VIAFIIIFGM CKLILYLVVV TFDNIITYKK IHLVSRISSV
VLSIIAVFIY LQIGLYLLSL YPHSFIQYQL SQSLLSRVVI EQIPYLSQFI LNL
|
|---|
| |