Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0719 |
Symbol | |
ID | 3240745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 713669 |
End bp | 716143 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637167378 |
Product | cell wall surface anchor family protein |
Protein accession | YP_188302 |
Protein GI | 57866639 |
COG category | [R] General function prediction only |
COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain [TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000554603 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT CTAGTAAATT TTCAAAAGAT TTCCCTACTA GAAAAAATCA TTACGCAATT AGAAAATTCA CAGTGGGCAC TGCTTCGATT ATCGTAGGAT CATTCTTATT TTTCGGACAA ACACAAGCTC ATGCTGAAGA ATTCGAAAGA GTAACTACTG GTACAGTTGA CACAGGTGGA CAGCCTGCTA GAGCAGATCA AGGACAAGAA GGACCACAAG CAGGCGCGGA TACGCACAAT ACAGCAAGTC AACCTGGTGC TACAGGTCAA GATGCACCAA ATGAAAATCA TGCTGGTGAC CAAAATGCTG CAGTAACACA TCCGGCTAAT CAAGAAAATA ATGCACCTCA AGTTGGGGCT GGTACTCCTG GCGCTGAGAA CACACCACAA GCCGGTGGTG AAAGTCATAA TCAAGATACT GCAGTAACTT CAGCAGGTAC TAATGGGGAA CAAAATGGTG GTAAACCAGC TACGTCAACA ACTGGTCAAG ATGCCGCGCA ATCCAATGGA CCTCAAGGTA CTTCAGTAGC CCAACCTGGT AATGATGCTT CTAGCCAAGG TCATGATACA CCTCAAGCTG ATGCTGGTAC TCATAATACA GAAGGCCAAC CTGCTGTAAC TACTGGTGAG CAAGCTGGTG GTAAGCCTGC TGCAACGAAA CCTGAAGGTG CCAGTGCAGA AACTGCGCCA GCGCCTAATA ATGCTGATGA AAATCACGCT CAACCTTCAC CGCAAACAGG AGGTACTACA GCAACACAAG CTGGACAAGT AAAACCATCC GGTGATTCTA CGCCTACCGG TGAGCCAAAC AAAGCAGACG ATCAAGGTAC ACAAATTAAA CCTACAAGTA ACCAAGGTAC TACAGCAACA ACTAATGAAA CTGGAAATCA AAAACCAAGT GGTCAAACAG GTAATACTGA GAACACGCCT AATGATGGTA CTCAATTAAA ACCTAATAAT GACCCAGCTG CGACTGGTAC GCCAAATACT AATGGAGAAC AAACTGGACA ACCTAATGCA ACAGTAACAC CAGGACAAGG TAATGAAGAG ATTAACGGAG CTAGTAAACC TGGAGAAGTG TCTCCGAAAC CTGAAGAAAA CAATCCAACT GCCACTGAAC CTGGTACAAC TGCACCTGGG AATACTAATC AAGACACACA AGTAAAACCT AATACAGATC AGACTGCTAC TGGTACTCCA GCTGGTACTG ATAATCAAAA TACGCAACAA GGCAATACTG AACAAAATAA CCAAAATGCT CAACCATCAG CACCTGGAAC AACTGATCAA TCCGGTGCTA CGGTTAAACC TAGTACTACA CCTAATCAAG ACGCTGAAGT TAAACCTAGT ACTACACCTA ATCAAGACGC TGAAGTTAAA CCTAATCCAG ATCAAAATAA TACACCAACT AATGGTCAAG ACGGGAATCA AACAGGTCAA GGTACTCAAG TAAAACCTAA TAACGATCAA ACGGCAACTG GTACTCAAGG TGCCACTGGT AATCAAAATG CTGAACAAGG TAATACTGAA CAAAATAACC AAAATGCTGA ACCATCAGCA CCTGGTACAA CTGATCAAGC CGGTGCTACG GTTAAACCTG GTACTACACC TAACCAAGAC GCTGAAGTTA AACCTAATAC AGATCAGACT GCTACTGGTA CTCAAGGTGC CACTGGTGAT CAAAATGCTG AACAAGGTAA TACTGAACAA AATAACCAAA ATGCTGAACA AGGTAATACT GGGCAAGAGG GTTCTAATCC TAATCAAAGT GGTCAGTTAG GTGCTACGGT TAAACCTGGA TCTGCTCCAA ATCAAGATAC TGAGGTAAAA CCTAATCCAG ATCAAAATAA TAACCCAACT ACTGGGCAAG ACGCGAATCA AACAGGTCAA GGTACTCAAG TAAAACCTAA TAACGATCAA ACGACAACTG GTACTCCAGC TGGTACTGAT AATCAAAATA CACAACAAGG AAATACTGAA CAAAACAATC AAAATGCTGA ACAAGGTAAT ACTGGGCAAG AGGGTTCTAA TCCTAATCAA AGTGGTCAGT TAGGTGCTAC GGTTAAACCT GGATCTGCTC CAAATCAAGA TACTGAAGCA ACCCCTAATC CAGATCAAAA TAATACACCA ACTAATGGTC AAGACGGGGA TCATACAGGT CAAGGTACTC AAGTAAAACC TAATCCAGAT CAGACTGCTA CTGGTACTCA AGGTGCCACT GGTGATCAAA ATACGCAACA AGGCAATACT GAACAAAATA ACCAAAATGC TGAACAAGGT AATACAGGCG GTACAGATAA AGATGCTAAA GTAAATACTA ATGATGATGA AACAAAAACA GATGTTAAAA ATGATACTGA ATTACCTGAA ACAGGACTAA GTAATGAATA TGATTATACA ACTACAGTAT TTGGTTCTAT CGCTTTAATA TCTTCACTTT TATTACTAAG ACGACAAAGA AAAGAATCTA AATAA
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Protein sequence | MKKSSKFSKD FPTRKNHYAI RKFTVGTASI IVGSFLFFGQ TQAHAEEFER VTTGTVDTGG QPARADQGQE GPQAGADTHN TASQPGATGQ DAPNENHAGD QNAAVTHPAN QENNAPQVGA GTPGAENTPQ AGGESHNQDT AVTSAGTNGE QNGGKPATST TGQDAAQSNG PQGTSVAQPG NDASSQGHDT PQADAGTHNT EGQPAVTTGE QAGGKPAATK PEGASAETAP APNNADENHA QPSPQTGGTT ATQAGQVKPS GDSTPTGEPN KADDQGTQIK PTSNQGTTAT TNETGNQKPS GQTGNTENTP NDGTQLKPNN DPAATGTPNT NGEQTGQPNA TVTPGQGNEE INGASKPGEV SPKPEENNPT ATEPGTTAPG NTNQDTQVKP NTDQTATGTP AGTDNQNTQQ GNTEQNNQNA QPSAPGTTDQ SGATVKPSTT PNQDAEVKPS TTPNQDAEVK PNPDQNNTPT NGQDGNQTGQ GTQVKPNNDQ TATGTQGATG NQNAEQGNTE QNNQNAEPSA PGTTDQAGAT VKPGTTPNQD AEVKPNTDQT ATGTQGATGD QNAEQGNTEQ NNQNAEQGNT GQEGSNPNQS GQLGATVKPG SAPNQDTEVK PNPDQNNNPT TGQDANQTGQ GTQVKPNNDQ TTTGTPAGTD NQNTQQGNTE QNNQNAEQGN TGQEGSNPNQ SGQLGATVKP GSAPNQDTEA TPNPDQNNTP TNGQDGDHTG QGTQVKPNPD QTATGTQGAT GDQNTQQGNT EQNNQNAEQG NTGGTDKDAK VNTNDDETKT DVKNDTELPE TGLSNEYDYT TTVFGSIALI SSLLLLRRQR KESK
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