| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0689 |
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| Symbol | potD |
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| ID | 3241058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 684419 |
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| End bp | 685492 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637167349 |
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| Product | spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein |
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| Protein accession | YP_188273 |
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| Protein GI | 57866622 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAT TTTTTCAACT TATCATTTCT GCTATAGTTA TTGGTATTTT ATGTTTAATG
ATTAGTCATT GGTTTAAATC AAAAGATAAT ACCCACTCAA ATGAGAAGTT ATATGTTTAC
AATTGGGGAG AATATATTGA TCCTAGCTTA ATTAAGAAGT TTAAAAAAGA AACAGGTATA
CAAGTCGTAT ATGAAACCTT TGATTCAAAT GAAGCAATGG AAGCGAAAAT TCGAAATGGA
GGCACACACT ATGATGTAGC TTTTCCAAGT GAATATACTG TTCAAAAATT AAAAAAAGCT
AAACTGCTTG AGACTTTAAA TCATGACAAA ATTCCAAATA TCAGAAATTT AGACAATGAT
TATATGAACT TGTCATATGA CCCAAACAAT CGATATTCAA TTCCATATTT CTTTGGTACC
GTAGGAATTT TATATGATAA AGAGAAATAT CCTAATGAAA CGTTCGATAG TTGGGACGAT
TTGTATCATT CTCAATTCAA AAATGATATT TTATTAGTAG ACGGTGCACG CGAGATAATT
GGAATGGGAT TAAATAAATT AGGGTATAGT CTTAATGACA AAAATCCGAC CCATATTCAT
CAAGCAGAAA AAGATTTGCA TAATTTAGCA CCTCAAGTTA GAGGGATAGT AGGCGACGAA
ATTACTATGA TGCTTCAACA AAACGAAGGA CATGTTGCAG TAGTTTGGAG TGGCGTTGCT
GCACCACTTG TACAGGAAAA TACTCGTTAT AATTACGTGA TACCTAAAGA AGGCTCTAAC
CTATGGTTTG ATAATATGGT GATACCTAAA ACTGCACAAA ATAAAGAAGG TGCGTATAAG
TTTATGAATT TCTTACTAGA CGCGCAAAAT AGTGCCCAGA ATACGGAATG GGTAGGATAT
GCAACACCTA ATAAAGCAGC TCGAAGTAAG TTGCCTAAAA AGGTAAGAAA TGATTATAGA
TTTTATCCAT CAAATCAAGA ACAGCAACGG TTAGAAGTCT ATAAAGATTT AGGTCAAACG
TCTCTCAGTG AATATAATGA AAGCTTTTTA AATTTTAAAA TGTCTTTAAA ATAG
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| Protein sequence | MKRFFQLIIS AIVIGILCLM ISHWFKSKDN THSNEKLYVY NWGEYIDPSL IKKFKKETGI
QVVYETFDSN EAMEAKIRNG GTHYDVAFPS EYTVQKLKKA KLLETLNHDK IPNIRNLDND
YMNLSYDPNN RYSIPYFFGT VGILYDKEKY PNETFDSWDD LYHSQFKNDI LLVDGAREII
GMGLNKLGYS LNDKNPTHIH QAEKDLHNLA PQVRGIVGDE ITMMLQQNEG HVAVVWSGVA
APLVQENTRY NYVIPKEGSN LWFDNMVIPK TAQNKEGAYK FMNFLLDAQN SAQNTEWVGY
ATPNKAARSK LPKKVRNDYR FYPSNQEQQR LEVYKDLGQT SLSEYNESFL NFKMSLK
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