| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0687 |
|---|
| Symbol | potB |
|---|
| ID | 3241056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 682801 |
|---|
| End bp | 683604 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637167347 |
|---|
| Product | spermidine/putrescine ABC transporter, permease protein PotB |
|---|
| Protein accession | YP_188271 |
|---|
| Protein GI | 57866620 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAATA TCAATAAATG GTTACTGGTT CCTTACTTAT TATGGATGGT TATATTTATT
ATCATTCCAG CCATTTTACT TGTTTACTTT TCTTTTATAG ATATTCATGG TCACTTTAGT
TTCACAAATT ATGAGCAGGT ATTTTCAACA AGATATTTAA AAATGTTTAT TGATTCAATA
TGGTATGCCG CTTTAATTAC TATGATTACC TTAATAATAA GTTACCCAGC TGCGTACTTT
ATTTCTTATT CAAGATTTCA AAATATACTG CTTATGTTGT TAATTATCCC TACTTGGATT
AATTTACTTC TTAAGACCTA TGCATTTATT GGTTTGTTGG GGCATGATGG AGTTATTAAC
CAAGCTCTAC ATATATTTCA AATACCTAAA TTAAATTTGT TGTTTACAAG TGGTGCATTT
TTATTGGTGG CGAGTTATAT TTATATCCCA TTTATGATTT TGCCTATATT TAACAGCATG
AAAGCAATTC CTAACAATAT TTTGCAAGCC TCTAATGATT TGGGCGCGAG TACATTTACT
ACGTTTCGTA AAGTAATCGT TCCTTTAACA AGAGAAGGTA TTAAAACAGG TGTGCAAGTA
ACATTTATAC CAGCTCTTTC ACTGTTTATG ATTACTAGGT TGATTGCCGG GAACAAAGTA
ATCAATGTAG GTACAGCAAT TGAAGAACAG TTCTTAACTA TACAAAATTA TGGATTAGGT
TCCACTATAG CACTTTTTCT CATTATTTTT ATGGCCTTTT TACTCATTAT TACAAAATCA
AAATCATCTA ATGGGAAGGG GTGA
|
|---|
| Protein sequence | MHNINKWLLV PYLLWMVIFI IIPAILLVYF SFIDIHGHFS FTNYEQVFST RYLKMFIDSI
WYAALITMIT LIISYPAAYF ISYSRFQNIL LMLLIIPTWI NLLLKTYAFI GLLGHDGVIN
QALHIFQIPK LNLLFTSGAF LLVASYIYIP FMILPIFNSM KAIPNNILQA SNDLGASTFT
TFRKVIVPLT REGIKTGVQV TFIPALSLFM ITRLIAGNKV INVGTAIEEQ FLTIQNYGLG
STIALFLIIF MAFLLIITKS KSSNGKG
|
|---|
| |