| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0683 |
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| Symbol | pdhD |
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| ID | 3240398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 679038 |
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| End bp | 680444 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637167343 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_188267 |
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| Protein GI | 57866609 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGTTG GAGATTTCCC AATTGAAACA GATACTATTG TAATAGGAGC AGGTCCAGGT
GGATATGTCG CAGCCATTCG CGCGGCTCAA TTAGGACAAA AGGTAACAAT CGTTGAGAAA
GGTAATTTAG GTGGTGTATG CTTAAACGTT GGTTGTATAC CTTCAAAAGC ATTACTACAT
GCTTCTCATC GCTTTGTTGA AGCGCAAAAT TCAGAAAACT TAGGGGTAAT TGCTGAAAGC
GTTTCGTTAA ACTATCAAAA AGTTCAAGAA TTCAAGACTT CTGTAGTTAA TAAATTAACT
GGCGGTGTTG AAGGACTTTT AAAAGGTAAC AAAGTAGAGA TTGTTAGAGG TGAAGCTTAT
TTCGTTGATA ACAATAGTTT ACGTGTCATG GACGAAAAGA GTGCTCAAAC TTACAATTTC
AAACATGCGA TTATAGCTAC AGGTTCAAGA CCAATTGAAA TTCCAAATTT TGAATTTGGT
AAACGTGTTA TCGATTCAAC AGGAGCTTTA AATCTACAAG AAGTACCTAA CAAACTAGTT
GTAGTTGGTG GCGGATATAT CGGTTCTGAA TTAGGTACTG CTTTTGCAAA CTTTGGCTCT
GAAGTTACTA TCCTTGAAGG TGCAAAAGAT ATTTTAGGCG GATTTGAAAA GCAAATGACA
CAACCTGTTA AAAAAGGTAT GAAAGAAAAA GGTATCGAAA TCGTTACTGA AGCAATGGCA
AAATCTGCAG AAGAAACTGA AAATGGTGTC AAAGTAACTT ATGAGGCAAA AGGTGAGGAA
CAAACTATCG AAGCTGATTA TGTATTAGTT ACAGTTGGCC GTCGCCCTAA TACTGATGAA
TTAGGATTAG AAGAACTTGG TCTGAAATTT GCTGATCGTG GATTACTAGA AGTGGACAAA
CAAAGTCGTA CTTCTATTGA AAATATCTTT GCGATTGGAG ATATTGTACC TGGATTACCA
TTAGCTCACA AAGCTAGTTA TGAAGGTAAA GTTGCTGCTG AAGCGATAGA TGGTCAAGCC
GCAGAGGTAG ACTATATTGG TATGCCAGCA GTTTGCTTTA CAGAACCAGA ATTAGCACAA
GTTGGTTATA CTGAAGCTCA AGCAAAAGAA GAAGGTTTAT CAATTAAAGC TTCTAAATTC
CCTTATGCAG CTAATGGACG AGCTTTATCA TTAGATGATA CAAATGGTTT TGTTAAGTTA
ATTACACTTA AAGAAGATGA TACGCTTATT GGAGCACAAG TTGTAGGTAC TGGCGCATCT
GATATTATCT CTGAATTAGG TTTAGCTATT GAGTCAGGTA TGAATGCTGA AGATATCGCA
TTAACTGTAC ATGCACACCC AACTTTAGGT GAAATGACAA TGGAAGCTGC TGAAAAAGCA
ATTGGTTATC CAATTCATAC TATGTAA
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| Protein sequence | MVVGDFPIET DTIVIGAGPG GYVAAIRAAQ LGQKVTIVEK GNLGGVCLNV GCIPSKALLH
ASHRFVEAQN SENLGVIAES VSLNYQKVQE FKTSVVNKLT GGVEGLLKGN KVEIVRGEAY
FVDNNSLRVM DEKSAQTYNF KHAIIATGSR PIEIPNFEFG KRVIDSTGAL NLQEVPNKLV
VVGGGYIGSE LGTAFANFGS EVTILEGAKD ILGGFEKQMT QPVKKGMKEK GIEIVTEAMA
KSAEETENGV KVTYEAKGEE QTIEADYVLV TVGRRPNTDE LGLEELGLKF ADRGLLEVDK
QSRTSIENIF AIGDIVPGLP LAHKASYEGK VAAEAIDGQA AEVDYIGMPA VCFTEPELAQ
VGYTEAQAKE EGLSIKASKF PYAANGRALS LDDTNGFVKL ITLKEDDTLI GAQVVGTGAS
DIISELGLAI ESGMNAEDIA LTVHAHPTLG EMTMEAAEKA IGYPIHTM
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