Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0642 |
Symbol | |
ID | 3241354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 636822 |
End bp | 637730 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167303 |
Product | ribonucleoside hydrolase RihC |
Protein accession | YP_188227 |
Protein GI | 57866528 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0188198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTATTC CCATTATAAT TGATACTGAT CCTGGTATAG ATGATGCTAC AGCAATTAGT ATCGCACTTT CACACCCTCA ATTTGACGTT AAAATGATAT CAACTGTGAA TGGTAATGTA GGTATTGAGA AAACGACAGC AAATGCATTA AAGCTAAAAA GGTTTTTTAA TAGTTCTGTT CCTGTACATA GAGGGGCATC CCAACCATTG ATTAATGACA TCTTTGAAGC TACATCAATT CATGGTGAGT CTGGTATGGA TGGTTACGAG TTTCCACAAA TAAATCAAGA TGATTTAACA TCAATTCATG CAGTTGAAGC AATGAGAAAT CTATTAGTAA ATACTCAAGA ACCTTTAACC TTGATTGCCA TAGGTCCACT AACAAATATC GCTATTCTTT TAACTAGTTA TCCCGAAGTT CAACCATTTA TTAAGGAAAT TGTTTTAATG GGTGGTAGTA CCGGTAGAGG TAATGTAACG CCTTTAGCTG AATTTAATAT ATATTGTGAT CCAGAAGCTG CTCAAATTGT ATTTAACTCT GGATTACCTT TGACTATGAT TGGTCTTGAT TTGGCTCGTG AAGCATTGTT TACTCACCAT TTTGTAAAAG ACTTCAAAGA TACAAATGCA ACTTCAAACA TGTTATATAA TTTATTTCAG CACTATAAGA GTGAAGATTT TGAAATAGGA TTTAAATTAT ACGATGTATT CACTATATTA TATTTGTTGG ATCCAGAAGC CTTTAATGTC AAGGAGGCGT ATACTCAAAT AGAATTAAAT GGCAACTTTA CAAGGGGAGC CACAGTGGTA GACTTTAATA TGGAGCATCC CAATTGTACA GTTGTTTTAA GTCCTGTTGA AAGACAGTAT GAGGATTTAT TCTTAAACGC CCTTTCTTAT TGTAAATAA
|
Protein sequence | MSIPIIIDTD PGIDDATAIS IALSHPQFDV KMISTVNGNV GIEKTTANAL KLKRFFNSSV PVHRGASQPL INDIFEATSI HGESGMDGYE FPQINQDDLT SIHAVEAMRN LLVNTQEPLT LIAIGPLTNI AILLTSYPEV QPFIKEIVLM GGSTGRGNVT PLAEFNIYCD PEAAQIVFNS GLPLTMIGLD LAREALFTHH FVKDFKDTNA TSNMLYNLFQ HYKSEDFEIG FKLYDVFTIL YLLDPEAFNV KEAYTQIELN GNFTRGATVV DFNMEHPNCT VVLSPVERQY EDLFLNALSY CK
|
| |