Gene SERP0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0642 
Symbol 
ID3241354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp636822 
End bp637730 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content34% 
IMG OID637167303 
Productribonucleoside hydrolase RihC 
Protein accessionYP_188227 
Protein GI57866528 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0188198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTC CCATTATAAT TGATACTGAT CCTGGTATAG ATGATGCTAC AGCAATTAGT 
ATCGCACTTT CACACCCTCA ATTTGACGTT AAAATGATAT CAACTGTGAA TGGTAATGTA
GGTATTGAGA AAACGACAGC AAATGCATTA AAGCTAAAAA GGTTTTTTAA TAGTTCTGTT
CCTGTACATA GAGGGGCATC CCAACCATTG ATTAATGACA TCTTTGAAGC TACATCAATT
CATGGTGAGT CTGGTATGGA TGGTTACGAG TTTCCACAAA TAAATCAAGA TGATTTAACA
TCAATTCATG CAGTTGAAGC AATGAGAAAT CTATTAGTAA ATACTCAAGA ACCTTTAACC
TTGATTGCCA TAGGTCCACT AACAAATATC GCTATTCTTT TAACTAGTTA TCCCGAAGTT
CAACCATTTA TTAAGGAAAT TGTTTTAATG GGTGGTAGTA CCGGTAGAGG TAATGTAACG
CCTTTAGCTG AATTTAATAT ATATTGTGAT CCAGAAGCTG CTCAAATTGT ATTTAACTCT
GGATTACCTT TGACTATGAT TGGTCTTGAT TTGGCTCGTG AAGCATTGTT TACTCACCAT
TTTGTAAAAG ACTTCAAAGA TACAAATGCA ACTTCAAACA TGTTATATAA TTTATTTCAG
CACTATAAGA GTGAAGATTT TGAAATAGGA TTTAAATTAT ACGATGTATT CACTATATTA
TATTTGTTGG ATCCAGAAGC CTTTAATGTC AAGGAGGCGT ATACTCAAAT AGAATTAAAT
GGCAACTTTA CAAGGGGAGC CACAGTGGTA GACTTTAATA TGGAGCATCC CAATTGTACA
GTTGTTTTAA GTCCTGTTGA AAGACAGTAT GAGGATTTAT TCTTAAACGC CCTTTCTTAT
TGTAAATAA
 
Protein sequence
MSIPIIIDTD PGIDDATAIS IALSHPQFDV KMISTVNGNV GIEKTTANAL KLKRFFNSSV 
PVHRGASQPL INDIFEATSI HGESGMDGYE FPQINQDDLT SIHAVEAMRN LLVNTQEPLT
LIAIGPLTNI AILLTSYPEV QPFIKEIVLM GGSTGRGNVT PLAEFNIYCD PEAAQIVFNS
GLPLTMIGLD LAREALFTHH FVKDFKDTNA TSNMLYNLFQ HYKSEDFEIG FKLYDVFTIL
YLLDPEAFNV KEAYTQIELN GNFTRGATVV DFNMEHPNCT VVLSPVERQY EDLFLNALSY
CK