| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0630 |
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| Symbol | menD |
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| ID | 3241486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 620890 |
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| End bp | 622563 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637167291 |
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| Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_188215 |
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| Protein GI | 57866509 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATC ATAGTGAAGC TTTAACTGAA CAAGTATTTT CATTTGCTTC AGAGCTTTAT
GCTTATGGTG TAAGAGAAGT AGTAATTAGT CCAGGTTCAC GTTCAACACC ATTAGCACTT
GTTTTCGAAG CACATCCAAA TATTAAAACA TGGATTCACC CTGATGAGCG AAGTGCTGCA
TTTTTTGCTT TAGGTCTTAT TAAAGGTAGC GAAAAACCTG TAGCAATTCT TTGTACATCT
GGAACAGCCG CTGCGAACTA CACACCCGCT ATAGCTGAAA GTCAAATTAG TCGTTTGCCT
CTCGTTGTTT TAACGAGCGA CAGACCGCAT GAACTGCGCA GTGTGGGTGC ACCTCAAGCA
ATCAATCAGG TAAATATGTT TAGTAATTAT GTGAACTTTC AATTTGATTT GCCGATTGCT
GATGGAAGTG AACATACAAT TGATACAATT AATTATCAAA TGCAAATTGC AAGTCAATAT
TTATATGGAC CACACCGAGG ACCGATTCAT TTTAATTTAC CATTTAGAGA ACCACTAACA
CCAGATTTAG ATCGTGTCGA TTTATTAACA TCTGTAACTA AAACGTTACC TCATTATCAG
AAATCGATTT CGGTAGATGA TATAAAAGAC ATATTACAAG AAAAAAATGG TCTCATCATT
GTCGGAGATA TGCAACACCA AGCTGTTGAT CAAATATTAA CGTATTCAAC TATATATGAT
CTGCCAATCT TAGCAGATCC CCTTAGTCAG CTTCGTAAAG AGAAACATCC TAATGTTATA
ACCACTTATG ATTTATTGTA TCGAGCAGGA TTAAATTTAG AAGTAGACTA TGTCATACGT
GTAGGTAAGC CAGTTATTTC TAAAAAATTA AATCAATGGT TGAAGAAAAC CGATGCGTAT
CAAATTATTG TGCAGAATAA TGATCAAATT GATGTATTTC CGACACCACC TCATATATCT
TATGAGATTT CAGCAAATGA TTTTTTCCGT TCATTAATGG AAGAACCACT TGTTGAACGA
AAAAAATGGT TACAGCAATG GCAATCACTT GAACAACAAG CACGCATTGA AATAAGTGAT
TACTTAAAGC ATGCGACAGA TGAAGCGGCA TATGTAGGGA GTTTAATTCA AAAACTTACA
AAAGAAGATA CATTATTTGT TGGAAATAGT ATGCCAATTA GAGATGTCGA TAATTTACTG
TTTGATAGTG AGGCATCTGT ATACGCTAAT CGGGGTGCCA ATGGAATAGA CGGAGTAGTT
TCAACTGCGC TAGGTATGGC GGCACATAAG AATGTGACAT TGCTTATTGG TGATTTATCT
TTTTATCATG ACATGAACGG TTTATTAATG GCCAAATTAA ATGAACTTCA TATTAACATT
GTATTAGTTA ATAACAACGG AGGAGGTATC TTTTCATATT TACCTCAAAA ACGATCGGCT
ACAAAATATT TTGAGCGATT ATTTGGAACA CCAACAGGCT TAAACTTTGA ATATACTGCA
CTGTTATATG ATTTTACATT TAAGCGCTTT GATAATTTGA CTGACTTTAA ATATGCTGAA
TTATCTAAAA TGGGTTCTCA CATGTATGAA GTTATAACCA ATAGAGACGA AAATTTGCAT
CAACACCAAA ATTTATATCA GAAATTGAGT GAGATTGTTA ATGTTACATT ATAA
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| Protein sequence | MMNHSEALTE QVFSFASELY AYGVREVVIS PGSRSTPLAL VFEAHPNIKT WIHPDERSAA
FFALGLIKGS EKPVAILCTS GTAAANYTPA IAESQISRLP LVVLTSDRPH ELRSVGAPQA
INQVNMFSNY VNFQFDLPIA DGSEHTIDTI NYQMQIASQY LYGPHRGPIH FNLPFREPLT
PDLDRVDLLT SVTKTLPHYQ KSISVDDIKD ILQEKNGLII VGDMQHQAVD QILTYSTIYD
LPILADPLSQ LRKEKHPNVI TTYDLLYRAG LNLEVDYVIR VGKPVISKKL NQWLKKTDAY
QIIVQNNDQI DVFPTPPHIS YEISANDFFR SLMEEPLVER KKWLQQWQSL EQQARIEISD
YLKHATDEAA YVGSLIQKLT KEDTLFVGNS MPIRDVDNLL FDSEASVYAN RGANGIDGVV
STALGMAAHK NVTLLIGDLS FYHDMNGLLM AKLNELHINI VLVNNNGGGI FSYLPQKRSA
TKYFERLFGT PTGLNFEYTA LLYDFTFKRF DNLTDFKYAE LSKMGSHMYE VITNRDENLH
QHQNLYQKLS EIVNVTL
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